Lineage for Species: Human (Homo sapiens)

  1. Root: SCOP 1.71
  2. 595667Class d: Alpha and beta proteins (a+b) [53931] (286 folds)
  3. 598488Fold d.15: beta-Grasp (ubiquitin-like) [54235] (12 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 598489Superfamily d.15.1: Ubiquitin-like [54236] (6 families) (S)
  5. 598490Family d.15.1.1: Ubiquitin-related [54237] (26 proteins)
    Pfam 00240
  6. 598557Protein Ubiquitin [54238] (3 species)
  7. 598561Species Human (Homo sapiens) [TaxId:9606] [54239] (19 PDB entries)
    identical sequence in many other species

PDB entries in Species: Human (Homo sapiens):

  1. Domain(s) for 1aar:
    1. 598570Domain d1aara_: 1aar A: [37586]
    2. 598571Domain d1aarb_: 1aar B: [37587]
      di-ubiquitin
  2. Domain(s) for 1c3t:
  3. Domain(s) for 1d3z:
  4. Domain(s) for 1f9j:
    1. 598576Domain d1f9ja_: 1f9j A: [37590]
    2. 598577Domain d1f9jb_: 1f9j B: [37591]
      a new crystal form of tetraubiquitin
  5. Domain(s) for 1fxt:
  6. Domain(s) for 1g6j:
  7. Domain(s) for 1gjz:
    1. 598579Domain d1gjza_: 1gjz A: [65223]
    2. 598580Domain d1gjzb_: 1gjz B: [65224]
  8. Domain(s) for 1nbf:
    1. 598572Domain d1nbfc_: 1nbf C: [80389]
      Other proteins in same PDB: d1nbfa_, d1nbfb_, d1nbfe_
    2. 598573Domain d1nbfd_: 1nbf D: [80390]
      Other proteins in same PDB: d1nbfa_, d1nbfb_, d1nbfe_
      complex with USP7
      complexed with glz
  9. Domain(s) for 1ogw:
    • 598564Domain d1ogwa_: 1ogw A: [87001]
      synthetic protein with fluoro-Leu at 50 and 67
      complexed with lef
  10. Domain(s) for 1p3q:
    1. 598584Domain d1p3qu_: 1p3q U: [87750]
      Other proteins in same PDB: d1p3qq_, d1p3qr_
    2. 598585Domain d1p3qv_: 1p3q V: [87751]
      Other proteins in same PDB: d1p3qq_, d1p3qr_
      annotated as bovine in PDB, identical to human sequence
      complexed with mse; mutant
  11. Domain(s) for 1q5w:
  12. Domain(s) for 1s1q:
    1. 598568Domain d1s1qb_: 1s1q B: [98352]
      Other proteins in same PDB: d1s1qa_, d1s1qc_
    2. 598569Domain d1s1qd_: 1s1q D: [98354]
      Other proteins in same PDB: d1s1qa_, d1s1qc_
      complexed with acy, cu, so4
  13. Domain(s) for 1sif:
  14. Domain(s) for 1tbe:
    1. 598574Domain d1tbea_: 1tbe A: [37588]
    2. 598575Domain d1tbeb_: 1tbe B: [37589]
      tetra-ubiquitin
  15. Domain(s) for 1ubi:
  16. Domain(s) for 1ubq:
  17. Domain(s) for 1ud7:
  18. Domain(s) for 1uzx:
    • 598567Domain d1uzxb_: 1uzx B: [100239]
      Other proteins in same PDB: d1uzxa_
      annotated as bovine in PDB, identical to human sequence
      complexed with mes, mso, so4
  19. Domain(s) for 1xd3:
    1. 598562Domain d1xd3b_: 1xd3 B: [115146]
      Other proteins in same PDB: d1xd3a_, d1xd3c_
    2. 598563Domain d1xd3d_: 1xd3 D: [115148]
      Other proteins in same PDB: d1xd3a_, d1xd3c_
      complexed with gve, mg

More info for Species Human (Homo sapiens) [TaxId:9606] from d.15.1.1 Ubiquitin

Timeline for Species Human (Homo sapiens) [TaxId:9606] from d.15.1.1 Ubiquitin: