SCOP 1.63: Family d.15.1.1: Ubiquitin-related

Lineage for Family d.15.1.1: Ubiquitin-related

1. Root: SCOP 1.63

2. Class d: Alpha and beta proteins (a+b) [53931] (224 folds)

3. Fold d.15: beta-Grasp (ubiquitin-like) [54235] (10 superfamilies)
   core: beta(2)-alpha-beta(2); mixed beta-sheet 2143

4. Superfamily d.15.1: Ubiquitin-like [54236] (6 families)

5. Family d.15.1.1: Ubiquitin-related [54237] (7 proteins)

Proteins:

1. Elongin B [54246] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [54247] (3 PDB entries)

2. Nedd8 [54244] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [54245] (1 PDB entry)

3. Rub1 [54248] (1 species)

   • Species Mouse-ear cress (Arabidopsis thaliana) [TaxId:3702] [54249] (1 PDB entry)

4. SUMO-1 (smt3 homologue) [54241] (2 species)

   1. Species Baker's yeast (Saccharomyces cerevisiae), smt3 [TaxId:4932] [54243] (2 PDB entries)

   2. Species Human (Homo sapiens) [TaxId:9606] [54242] (1 PDB entry)

5. Ubiquitin [54238] (2 species)

   1. Species Human (Homo sapiens) [TaxId:9606] [54239] (12 PDB entries)
      identical sequence in many other species

   2. Species Synthetic, based on Saccharomyces cerevisiae sequence [54240] (1 PDB entry)

6. Ubiquitin-like modifier protein hub1 [82579] (1 species)

   • Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [82580] (1 PDB entry)

7. Ubiquitin-like N-terminal domain of PLIC-2 [75358] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [75359] (1 PDB entry)

More info for Family d.15.1.1: Ubiquitin-related

Timeline for Family d.15.1.1: Ubiquitin-related:

• Family d.15.1.1: Ubiquitin-related first appeared (with stable ids) in SCOP 1.55
  
• Family d.15.1.1: Ubiquitin-related appears in SCOP 1.61
  
• Family d.15.1.1: Ubiquitin-related appears in SCOP 1.65
  
• Family d.15.1.1: Ubiquitin-related appears in the current release, SCOPe 2.08