SCOPe 2.07: Species: Zoogloea ramigera [TaxId: 350]

Lineage for Species: Zoogloea ramigera [TaxId: 350]

Root: SCOPe 2.07
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.95: Thiolase-like [53900] (1 superfamily)
consists of two similar domains related by pseudo dyad; duplication
3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32451; strand 5 is antiparallel to the rest

Superfamily c.95.1: Thiolase-like [53901] (3 families)
Family c.95.1.1: Thiolase-related [53902] (10 proteins)
Protein Biosynthetic thiolase [53905] (1 species)
Species Zoogloea ramigera [TaxId:350] [53906] (16 PDB entries)
Uniprot P07097

PDB entries in Species: Zoogloea ramigera [TaxId: 350]:

Domain(s) for 1dlu:
1. Domain d1dlua1: 1dlu A:4-268 [35916]
  complexed with mpd, so4
2. Domain d1dlua2: 1dlu A:269-392 [35917]
  complexed with mpd, so4
3. Domain d1dlub1: 1dlu B:4-268 [35918]
  complexed with mpd, so4
4. Domain d1dlub2: 1dlu B:269-392 [35919]
  complexed with mpd, so4
5. Domain d1dluc1: 1dlu C:4-268 [35920]
  complexed with mpd, so4
6. Domain d1dluc2: 1dlu C:269-392 [35921]
  complexed with mpd, so4
7. Domain d1dlud1: 1dlu D:4-268 [35922]
  complexed with mpd, so4
8. Domain d1dlud2: 1dlu D:269-392 [35923]
  complexed with mpd, so4
Domain(s) for 1dlv:
1. Domain d1dlva1: 1dlv A:4-268 [35924]
  complexed with coa, so4
2. Domain d1dlva2: 1dlv A:269-392 [35925]
  complexed with coa, so4
3. Domain d1dlvb1: 1dlv B:4-268 [35926]
  complexed with coa, so4
4. Domain d1dlvb2: 1dlv B:269-392 [35927]
  complexed with coa, so4
5. Domain d1dlvc1: 1dlv C:4-268 [35928]
  complexed with coa, so4
6. Domain d1dlvc2: 1dlv C:269-392 [35929]
  complexed with coa, so4
7. Domain d1dlvd1: 1dlv D:4-268 [35930]
  complexed with coa, so4
8. Domain d1dlvd2: 1dlv D:269-392 [35931]
  complexed with coa, so4
Domain(s) for 1dm3:
1. Domain d1dm3a1: 1dm3 A:4-268 [59118]
  complexed with aco, so4
2. Domain d1dm3a2: 1dm3 A:269-392 [59119]
  complexed with aco, so4
3. Domain d1dm3b1: 1dm3 B:4-268 [59120]
  complexed with aco, so4
4. Domain d1dm3b2: 1dm3 B:269-392 [59121]
  complexed with aco, so4
5. Domain d1dm3c1: 1dm3 C:4-268 [59122]
  complexed with aco, so4
6. Domain d1dm3c2: 1dm3 C:269-392 [59123]
  complexed with aco, so4
7. Domain d1dm3d1: 1dm3 D:4-268 [59124]
  complexed with aco, so4
8. Domain d1dm3d2: 1dm3 D:269-392 [59125]
  complexed with aco, so4
Domain(s) for 1m1o:
1. Domain d1m1oa1: 1m1o A:3-268 [78425]
  complexed with caa, so4; mutant
2. Domain d1m1oa2: 1m1o A:269-392 [78426]
  complexed with caa, so4; mutant
3. Domain d1m1ob1: 1m1o B:3-268 [78427]
  complexed with caa, so4; mutant
4. Domain d1m1ob2: 1m1o B:269-392 [78428]
  complexed with caa, so4; mutant
5. Domain d1m1oc1: 1m1o C:3-268 [78429]
  complexed with caa, so4; mutant
6. Domain d1m1oc2: 1m1o C:269-392 [78430]
  complexed with caa, so4; mutant
7. Domain d1m1od1: 1m1o D:3-268 [78431]
  complexed with caa, so4; mutant
8. Domain d1m1od2: 1m1o D:269-392 [78432]
  complexed with caa, so4; mutant
Domain(s) for 1m1t:
1. Domain d1m1ta1: 1m1t A:1-268 [78433]
  complexed with gol, so4; mutant
2. Domain d1m1ta2: 1m1t A:269-392 [78434]
  complexed with gol, so4; mutant
3. Domain d1m1tb1: 1m1t B:1-268 [78435]
  complexed with gol, so4; mutant
4. Domain d1m1tb2: 1m1t B:269-392 [78436]
  complexed with gol, so4; mutant
5. Domain d1m1tc1: 1m1t C:1-268 [78437]
  complexed with gol, so4; mutant
6. Domain d1m1tc2: 1m1t C:269-392 [78438]
  complexed with gol, so4; mutant
7. Domain d1m1td1: 1m1t D:1-268 [78439]
  complexed with gol, so4; mutant
8. Domain d1m1td2: 1m1t D:269-392 [78440]
  complexed with gol, so4; mutant
Domain(s) for 1m3k:
1. Domain d1m3ka1: 1m3k A:1-268 [78565]
  complexed with gol, so4; mutant
2. Domain d1m3ka2: 1m3k A:269-392 [78566]
  complexed with gol, so4; mutant
3. Domain d1m3kb1: 1m3k B:1-268 [78567]
  complexed with gol, so4; mutant
4. Domain d1m3kb2: 1m3k B:269-392 [78568]
  complexed with gol, so4; mutant
5. Domain d1m3kc1: 1m3k C:1-268 [78569]
  complexed with gol, so4; mutant
6. Domain d1m3kc2: 1m3k C:269-392 [78570]
  complexed with gol, so4; mutant
7. Domain d1m3kd1: 1m3k D:1-268 [78571]
  complexed with gol, so4; mutant
8. Domain d1m3kd2: 1m3k D:269-392 [78572]
  complexed with gol, so4; mutant
Domain(s) for 1m3z:
1. Domain d1m3za1: 1m3z A:3-268 [78587]
  complexed with aco, so4; mutant
2. Domain d1m3za2: 1m3z A:269-392 [78588]
  complexed with aco, so4; mutant
3. Domain d1m3zb1: 1m3z B:3-268 [78589]
  complexed with aco, so4; mutant
4. Domain d1m3zb2: 1m3z B:269-392 [78590]
  complexed with aco, so4; mutant
5. Domain d1m3zc1: 1m3z C:3-268 [78591]
  complexed with aco, so4; mutant
6. Domain d1m3zc2: 1m3z C:269-392 [78592]
  complexed with aco, so4; mutant
7. Domain d1m3zd1: 1m3z D:3-268 [78593]
  complexed with aco, so4; mutant
8. Domain d1m3zd2: 1m3z D:269-392 [78594]
  complexed with aco, so4; mutant
Domain(s) for 1m4s:
1. Domain d1m4sa1: 1m4s A:1-268 [78609]
  complexed with gol, so4
2. Domain d1m4sa2: 1m4s A:269-392 [78610]
  complexed with gol, so4
3. Domain d1m4sb1: 1m4s B:1-268 [78611]
  complexed with gol, so4
4. Domain d1m4sb2: 1m4s B:269-392 [78612]
  complexed with gol, so4
5. Domain d1m4sc1: 1m4s C:1-268 [78613]
  complexed with gol, so4
6. Domain d1m4sc2: 1m4s C:269-392 [78614]
  complexed with gol, so4
7. Domain d1m4sd1: 1m4s D:1-268 [78615]
  complexed with gol, so4
8. Domain d1m4sd2: 1m4s D:269-392 [78616]
  complexed with gol, so4
Domain(s) for 1m4t:
1. Domain d1m4ta1: 1m4t A:3-268 [78617]
  complexed with gol, so4
2. Domain d1m4ta2: 1m4t A:269-392 [78618]
  complexed with gol, so4
3. Domain d1m4tb1: 1m4t B:3-268 [78619]
  complexed with gol, so4
4. Domain d1m4tb2: 1m4t B:269-392 [78620]
  complexed with gol, so4
5. Domain d1m4tc1: 1m4t C:3-268 [78621]
  complexed with gol, so4
6. Domain d1m4tc2: 1m4t C:269-392 [78622]
  complexed with gol, so4
7. Domain d1m4td1: 1m4t D:3-268 [78623]
  complexed with gol, so4
8. Domain d1m4td2: 1m4t D:269-392 [78624]
  complexed with gol, so4
Domain(s) for 1nl7:
1. Domain d1nl7a1: 1nl7 A:3-268 [91954]
  complexed with coa, so4
2. Domain d1nl7a2: 1nl7 A:269-392 [91955]
  complexed with coa, so4
3. Domain d1nl7b1: 1nl7 B:3-268 [91956]
  complexed with coa, so4
4. Domain d1nl7b2: 1nl7 B:269-392 [91957]
  complexed with coa, so4
5. Domain d1nl7c1: 1nl7 C:3-268 [91958]
  complexed with coa, so4
6. Domain d1nl7c2: 1nl7 C:269-392 [91959]
  complexed with coa, so4
7. Domain d1nl7d1: 1nl7 D:3-268 [91960]
  complexed with coa, so4
8. Domain d1nl7d2: 1nl7 D:269-392 [91961]
  complexed with coa, so4
Domain(s) for 1ou6:
1. Domain d1ou6a1: 1ou6 A:1-268 [104025]
  complexed with 168, so4
2. Domain d1ou6a2: 1ou6 A:269-392 [104026]
  complexed with 168, so4
3. Domain d1ou6b1: 1ou6 B:1-268 [104027]
  complexed with 168, so4
4. Domain d1ou6b2: 1ou6 B:269-392 [104028]
  complexed with 168, so4
5. Domain d1ou6c1: 1ou6 C:1-268 [104029]
  complexed with 168, so4
6. Domain d1ou6c2: 1ou6 C:269-392 [104030]
  complexed with 168, so4
7. Domain d1ou6d1: 1ou6 D:1-268 [104031]
  complexed with 168, so4
8. Domain d1ou6d2: 1ou6 D:269-392 [104032]
  complexed with 168, so4
Domain(s) for 1qfl:
1. Domain d1qfla1: 1qfl A:4-268 [35908]
  complexed with coa, so4
2. Domain d1qfla2: 1qfl A:269-392 [35909]
  complexed with coa, so4
3. Domain d1qflb1: 1qfl B:4-268 [35910]
  complexed with coa, so4
4. Domain d1qflb2: 1qfl B:269-392 [35911]
  complexed with coa, so4
5. Domain d1qflc1: 1qfl C:4-268 [35912]
  complexed with coa, so4
6. Domain d1qflc2: 1qfl C:269-392 [35913]
  complexed with coa, so4
7. Domain d1qfld1: 1qfl D:4-268 [35914]
  complexed with coa, so4
8. Domain d1qfld2: 1qfl D:269-392 [35915]
  complexed with coa, so4
Domain(s) for 2vtz:
1. Domain d2vtza1: 2vtz A:4-268 [206446]
  automated match to d1m3ka1
  complexed with coa, so4; mutant
2. Domain d2vtza2: 2vtz A:269-392 [206447]
  automated match to d1m3ka2
  complexed with coa, so4; mutant
3. Domain d2vtzb1: 2vtz B:4-268 [206448]
  automated match to d1m3ka1
  complexed with coa, so4; mutant
4. Domain d2vtzb2: 2vtz B:269-392 [206449]
  automated match to d1m3ka2
  complexed with coa, so4; mutant
5. Domain d2vtzc1: 2vtz C:4-268 [206450]
  automated match to d1m3ka1
  complexed with coa, so4; mutant
6. Domain d2vtzc2: 2vtz C:269-392 [206451]
  automated match to d1m3ka2
  complexed with coa, so4; mutant
7. Domain d2vtzd1: 2vtz D:4-268 [206452]
  automated match to d1m3ka1
  complexed with coa, so4; mutant
8. Domain d2vtzd2: 2vtz D:269-392 [206453]
  automated match to d1m3ka2
  complexed with coa, so4; mutant
Domain(s) for 2vu0:
1. Domain d2vu0a1: 2vu0 A:2-268 [206454]
  automated match to d1m4sa1
  complexed with coa, gol, so4
2. Domain d2vu0a2: 2vu0 A:269-392 [206455]
  automated match to d1m4sa2
  complexed with coa, gol, so4
3. Domain d2vu0b1: 2vu0 B:2-268 [206456]
  automated match to d1m4sa1
  complexed with coa, gol, so4
4. Domain d2vu0b2: 2vu0 B:269-392 [206457]
  automated match to d1m4sa2
  complexed with coa, gol, so4
5. Domain d2vu0c1: 2vu0 C:2-268 [206458]
  automated match to d1m4sa1
  complexed with coa, gol, so4
6. Domain d2vu0c2: 2vu0 C:269-392 [206459]
  automated match to d1m4sa2
  complexed with coa, gol, so4
7. Domain d2vu0d1: 2vu0 D:3-268 [206460]
  automated match to d1m4ta1
  complexed with coa, gol, so4
8. Domain d2vu0d2: 2vu0 D:269-392 [206461]
  automated match to d1m4ta2
  complexed with coa, gol, so4
Domain(s) for 2vu1:
1. Domain d2vu1a1: 2vu1 A:2-268 [206462]
  automated match to d1m4sa1
  complexed with na, opi, so4
2. Domain d2vu1a2: 2vu1 A:269-392 [206463]
  automated match to d1m4sa2
  complexed with na, opi, so4
3. Domain d2vu1b1: 2vu1 B:1-268 [206464]
  automated match to d1m4sa1
  complexed with na, opi, so4
4. Domain d2vu1b2: 2vu1 B:269-392 [206465]
  automated match to d1m4sa2
  complexed with na, opi, so4
5. Domain d2vu1c1: 2vu1 C:2-268 [206466]
  automated match to d1m4sa1
  complexed with na, opi, so4
6. Domain d2vu1c2: 2vu1 C:269-392 [206467]
  automated match to d1m4sa2
  complexed with na, opi, so4
7. Domain d2vu1d1: 2vu1 D:3-268 [206468]
  automated match to d1m4ta1
  complexed with na, opi, so4
8. Domain d2vu1d2: 2vu1 D:269-392 [206469]
  automated match to d1m4ta2
  complexed with na, opi, so4
Domain(s) for 2vu2:
1. Domain d2vu2a1: 2vu2 A:4-268 [206470]
  automated match to d1m4ta1
  complexed with pn5, so4
2. Domain d2vu2a2: 2vu2 A:269-392 [206471]
  automated match to d1m4ta2
  complexed with pn5, so4
3. Domain d2vu2b1: 2vu2 B:4-268 [206472]
  automated match to d1m4ta1
  complexed with pn5, so4
4. Domain d2vu2b2: 2vu2 B:269-392 [206473]
  automated match to d1m4ta2
  complexed with pn5, so4
5. Domain d2vu2c1: 2vu2 C:4-268 [206474]
  automated match to d1m4ta1
  complexed with pn5, so4
6. Domain d2vu2c2: 2vu2 C:269-392 [206475]
  automated match to d1m4ta2
  complexed with pn5, so4
7. Domain d2vu2d1: 2vu2 D:4-268 [206476]
  automated match to d1m4ta1
  complexed with pn5, so4
8. Domain d2vu2d2: 2vu2 D:269-392 [206477]
  automated match to d1m4ta2
  complexed with pn5, so4

More info for Species Zoogloea ramigera [TaxId:350] from c.95.1.1 Biosynthetic thiolase

Timeline for Species Zoogloea ramigera [TaxId:350] from c.95.1.1 Biosynthetic thiolase:

Species Zoogloea ramigera [TaxId:350] from c.95.1.1 Biosynthetic thiolase first appeared (with stable ids) in SCOP 1.55
Species Zoogloea ramigera [TaxId:350] from c.95.1.1 Biosynthetic thiolase appears in SCOPe 2.06
Species Zoogloea ramigera [TaxId:350] from c.95.1.1 Biosynthetic thiolase does not appear in SCOPe 2.08