SCOP 1.67: Family c.93.1.1: L-arabinose binding protein-like

Lineage for Family c.93.1.1: L-arabinose binding protein-like

1. Root: SCOP 1.67

2. Class c: Alpha and beta proteins (a/b) [51349] (130 folds)

3. Fold c.93: Periplasmic binding protein-like I [53821] (1 superfamily)
   consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
   parallel beta-sheet of 6 strands, order 213456

4. Superfamily c.93.1: Periplasmic binding protein-like I [53822] (1 family)
   Similar in architecture to the superfamily II but partly differs in topology

5. Family c.93.1.1: L-arabinose binding protein-like [53823] (13 proteins)

Proteins:

1. Amide receptor/negative regulator of the amidase operon (AmiC) [53833] (1 species)

   • Species Pseudomonas aeruginosa [TaxId:287] [53834] (3 PDB entries)

2. D-allose-binding protein [53828] (1 species)

   • Species Escherichia coli [TaxId:562] [53829] (3 PDB entries)

3. D-ribose-binding protein [53824] (1 species)

   • Species Escherichia coli, strain k-12 [TaxId:562] [53825] (6 PDB entries)

4. Galactose/glucose-binding protein [53830] (2 species)

   1. Species Escherichia coli [TaxId:562] [53831] (2 PDB entries)

   2. Species Salmonella typhimurium, strain lt2 [TaxId:90371] [53832] (3 PDB entries)

5. Hormone binding domain of the atrial natriuretic peptide receptor [53845] (2 species)

   1. Species Human (Homo sapiens) [TaxId:9606] [64190] (2 PDB entries)

   2. Species Rat (Rattus norvegicus) [TaxId:10116] [53846] (1 PDB entry)

6. L-arabinose-binding protein [53826] (1 species)

   • Species Escherichia coli [TaxId:562] [53827] (9 PDB entries)

7. Lac-repressor (lacR) core (C-terminal domain) [53837] (1 species)

   • Species Escherichia coli [TaxId:562] [53838] (8 PDB entries)

8. Leucine-,isoleucine-,valine-binding (LIV) protein [53841] (1 species)

   • Species Escherichia coli [TaxId:562] [53842] (1 PDB entry)

9. Leucine-binding protein [53843] (1 species)

   • Species Escherichia coli [TaxId:562] [53844] (4 PDB entries)

10. Metabotropic glutamate receptor subtype 1 [53847] (1 species)

    • Species Rat (Rattus norvegicus) [TaxId:10116] [53848] (5 PDB entries)

11. Purine repressor (PurR), C-terminal domain [53835] (1 species)

    • Species Escherichia coli [TaxId:562] [53836] (24 PDB entries)

12. Quorum-sensing signal (autoinducer-2) binding protein LuxP [69622] (1 species)

    • Species Vibrio harveyi [TaxId:669] [69623] (1 PDB entry)

13. Trehalose repressor, C-terminal domain [53839] (1 species)

    • Species Escherichia coli [TaxId:562] [53840] (1 PDB entry)

More info for Family c.93.1.1: L-arabinose binding protein-like

Timeline for Family c.93.1.1: L-arabinose binding protein-like:

• Family c.93.1.1: L-arabinose binding protein-like first appeared (with stable ids) in SCOP 1.55
  
• Family c.93.1.1: L-arabinose binding protein-like appears in SCOP 1.65
  
• Family c.93.1.1: L-arabinose binding protein-like appears in SCOP 1.69
  
• Family c.93.1.1: L-arabinose binding protein-like appears in the current release, SCOPe 2.08