SCOPe 2.05: Family c.72.1.1: Ribokinase-like

Lineage for Family c.72.1.1: Ribokinase-like

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.72: Ribokinase-like [53612] (3 superfamilies)
   core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
   potential superfamily: members of this fold have similar functions but different ATP-binding sites

4. Superfamily c.72.1: Ribokinase-like [53613] (6 families)
   has extra strand located between strands 2 and 3

5. Family c.72.1.1: Ribokinase-like [53614] (10 proteins)
   automatically mapped to Pfam PF00294

Proteins:

1. 2-keto-3-deoxygluconate kinase [75295] (2 species)

   1. Species Thermotoga maritima, TM0067 [TaxId:2336] [75296] (1 PDB entry)

   2. Species Thermus thermophilus [TaxId:274] [102640] (4 PDB entries)

2. Adenosine kinase [53617] (2 species)

   1. Species Human (Homo sapiens) [TaxId:9606] [53618] (4 PDB entries)

   2. Species Toxoplasma gondii [TaxId:5811] [53619] (10 PDB entries)

3. Aminoimidazole riboside kinase [117720] (1 species)

   • Species Salmonella typhimurium [TaxId:90371] [117721] (3 PDB entries)
     Uniprot Q8ZKR2

4. Fructose 1-phosphate kinase FruB [142712] (1 species)

   • Species Bacillus halodurans [TaxId:86665] [142713] (1 PDB entry)
     Uniprot Q9KEM5 1-306

5. Hypothetical fructokinase ST2478 [142714] (1 species)

   • Species Sulfolobus tokodaii [TaxId:111955] [142715] (1 PDB entry)
     Uniprot Q96XN9 2-309

6. Hypothetical protein TM0415 [102641] (1 species)

   • Species Thermotoga maritima [TaxId:2336] [102642] (1 PDB entry)

7. Putative sugar kinase TM0828 [82518] (1 species)

   • Species Thermotoga maritima [TaxId:2336] [82519] (1 PDB entry)

8. Ribokinase [53615] (3 species)

   1. Species Escherichia coli [TaxId:562] [53616] (5 PDB entries)

   2. Species Human (Homo sapiens) [TaxId:9606] [142709] (1 PDB entry)
      Uniprot Q9H477 15-322

   3. Species Thermotoga maritima [TaxId:2336] [110706] (1 PDB entry)
      Uniprot Q9X055

9. Tagatose-6-phosphate kinase LacC [142710] (1 species)

   • Species Enterococcus faecalis [TaxId:1351] [142711] (1 PDB entry)
     Uniprot Q833W9 1-313

10. automated matches [190470] (2 species)
    not a true protein

    1. Species Bacillus halodurans [TaxId:86665] [187390] (1 PDB entry)

    2. Species Sulfolobus solfataricus [TaxId:2287] [188040] (2 PDB entries)

More info for Family c.72.1.1: Ribokinase-like

Timeline for Family c.72.1.1: Ribokinase-like:

• Family c.72.1.1: Ribokinase-like first appeared (with stable ids) in SCOP 1.55
  
• Family c.72.1.1: Ribokinase-like appears in SCOPe 2.04
  
• Family c.72.1.1: Ribokinase-like appears in SCOPe 2.06
  
• Family c.72.1.1: Ribokinase-like appears in the current release, SCOPe 2.08