Lineage for Family c.67.1.4: GABA-aminotransferase-like

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2130990Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
    main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest
  4. 2130991Superfamily c.67.1: PLP-dependent transferases [53383] (10 families) (S)
  5. 2131690Family c.67.1.4: GABA-aminotransferase-like [53417] (17 protein domains)
    formerly omega-Aminoacid:pyruvate aminotransferase-like

Protein Domains:

  1. 21316911-aminocyclopropane-1-carboxylate synthase (ACC synthase) [53440] (2 species)
    1. 2131692Species Apple (Malus domestica) [TaxId:3750] [53441] (5 PDB entries)
    2. 2131699Species Tomato (Lycopersicon esculentum) [TaxId:4081] [64130] (2 PDB entries)
  2. 21317032-amino-3-ketobutyrate CoA ligase [64128] (1 species)
  3. 21317073-amino-5-hydroxybenzoic acid synthase (AHBA synthase) [53434] (1 species)
  4. 21317114-aminobutyrate aminotransferase, GABA-aminotransferase [53424] (2 species)
    1. 2131712Species Escherichia coli [TaxId:562] [110686] (5 PDB entries)
      Uniprot P22256
    2. 2131733Species Pig (Sus scrofa) [TaxId:9823] [53425] (8 PDB entries)
  5. 21317625-aminolevulinate synthase [142676] (1 species)
  6. 2131765Acetylornithine/acetyl-lysine aminotransferase ArgD [142674] (1 species)
  7. 2131773Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA [53438] (2 species)
    synonym: 7,8-diaminopelargonic acid synthase
    1. 2131774Species Bacillus subtilis [TaxId:1423] [188929] (2 PDB entries)
    2. 2131779Species Escherichia coli [TaxId:562] [53439] (11 PDB entries)
  8. 2131802Aminotransferase ArnB [82488] (1 species)
    4-amino-4-deoxy-L-arabinose liposaccharide modifying enzyme
  9. 2131807Aminotransferase homolog WlaK (PglE, Cj1121c) [102603] (1 species)
  10. 2131815Dialkylglycine decarboxylase [53418] (1 species)
  11. 2131830Glutamate-1-semialdehyde aminomutase (aminotransferase) [53420] (2 species)
    1. 2131831Species Synechococcus elongatus [TaxId:32046] [142669] (1 PDB entry)
      Uniprot Q8DLK8 45-437
    2. 2131833Species Synechococcus sp., strain GR6 [TaxId:1131] [53421] (3 PDB entries)
  12. 2131840Ornithine aminotransferase [53422] (3 species)
    1. 2131841Species Human (Homo sapiens) [TaxId:9606] [53423] (7 PDB entries)
    2. 2131858Species Plasmodium falciparum [TaxId:5836] [189413] (1 PDB entry)
    3. 2131863Species Plasmodium yoelii yoelii [TaxId:73239] [142670] (1 PDB entry)
      Uniprot Q7RT90 7-410
  13. 2131870Phosphoserine aminotransferase, PSAT [53426] (3 species)
    1. 2131871Species Bacillus alcalophilus [TaxId:1445] [117697] (12 PDB entries)
      Uniprot Q9RME2
    2. 2131896Species Bacillus circulans, subsp. alkalophilus [TaxId:1397] [53427] (3 PDB entries)
      Uniprot Q59196
    3. 2131901Species Escherichia coli [TaxId:562] [53428] (2 PDB entries)
  14. 2131906PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) [53436] (1 species)
  15. 2131911Serine hydroxymethyltransferase [53429] (6 species)
    1. 2131912Species Bacillus stearothermophilus [TaxId:1422] [75272] (39 PDB entries)
    2. 2131954Species Escherichia coli [TaxId:562] [53433] (2 PDB entries)
    3. 2131963Species Human (Homo sapiens) [TaxId:9606] [53432] (1 PDB entry)
    4. 2131965Species Human (Homo sapiens), mitochondrial [TaxId:9606] [142671] (4 PDB entries)
      Uniprot P34897 42-504
    5. 2131970Species Mouse (Mus musculus) [TaxId:10090] [53431] (1 PDB entry)
    6. 2131975Species Rabbit (Oryctolagus cuniculus) [TaxId:9986] [53430] (6 PDB entries)
      Uniprot P07511
  16. 2131990Spore coat polysaccharide biosynthesis protein C [142672] (1 species)
  17. 2131998automated matches [190152] (22 species)
    not a true protein
    1. 2131999Species Bacillus anthracis [TaxId:261594] [189189] (1 PDB entry)
    2. 2132004Species Bacillus subtilis [TaxId:1423] [188688] (1 PDB entry)
    3. 2132006Species Burkholderia cenocepacia [TaxId:216591] [229698] (4 PDB entries)
    4. 2132021Species Burkholderia cepacia [TaxId:292] [186906] (3 PDB entries)
    5. 2132025Species Campylobacter jejuni [TaxId:197] [275525] (1 PDB entry)
    6. 2132027Species Coxiella burnetii [TaxId:227377] [193632] (1 PDB entry)
    7. 2132030Species Escherichia coli [TaxId:562] [187107] (1 PDB entry)
    8. 2132032Species Human (Homo sapiens) [TaxId:9606] [255069] (1 PDB entry)
    9. 2132035Species Plasmodium falciparum [TaxId:36329] [255985] (1 PDB entry)
    10. 2132040Species Rhodobacter capsulatus [TaxId:1061] [187497] (3 PDB entries)
    11. 2132052Species Salmonella enterica [TaxId:90371] [237706] (1 PDB entry)
    12. 2132054Species Salmonella typhimurium [TaxId:90371] [188804] (1 PDB entry)
    13. 2132057Species Staphylococcus aureus [TaxId:93062] [189536] (1 PDB entry)
    14. 2132062Species Streptococcus thermophilus [TaxId:299768] [270038] (3 PDB entries)
    15. 2132071Species Synechococcus elongatus [TaxId:1140] [193337] (1 PDB entry)
    16. 2132073Species Synechococcus elongatus [TaxId:269084] [187818] (8 PDB entries)
    17. 2132089Species Thermus thermophilus HB8 [TaxId:300852] [187623] (1 PDB entry)
    18. 2132092Species Wild boar (Sus scrofa) [311140] (1 PDB entry)
    19. 2132097Species Yersinia pestis [TaxId:214092] [189635] (1 PDB entry)
    20. 2275153Species Arabidopsis thaliana [TaxId:3702] [318454] (1 PDB entry)
    21. 2285741Species Citrobacter rodentium [TaxId:97825] [329042] (1 PDB entry)
    22. 2291057Species Acinetobacter baumannii [TaxId:470] [334358] (1 PDB entry)

More info for Family c.67.1.4: GABA-aminotransferase-like

Timeline for Family c.67.1.4: GABA-aminotransferase-like: