Lineage for Species: Escherichia coli [TaxId: 562]
- Root: SCOPe 2.04
Class c: Alpha and beta proteins (a/b) [51349] (148 folds) 
Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the restSuperfamily c.55.3: Ribonuclease H-like [53098] (15 families) 
consists of one domain of this fold
Family c.55.3.5: DnaQ-like 3'-5' exonuclease [53118] (16 proteins)
contains Pfam PF00929
Protein Exonuclease domain of prokaryotic DNA polymerase [53119] (3 species)
part of Klenow fragment, KF
Species Escherichia coli [TaxId:562] [53120] (14 PDB entries)
PDB entries in Species: Escherichia coli [TaxId: 562]:
- Domain(s) for 1d8y:
Domain d1d8ya1: 1d8y A:324-518 [33684]
Other proteins in same PDB: d1d8ya2
protein/DNA complex; complexed with so4, zn
- Domain(s) for 1d9d:
Domain d1d9da1: 1d9d A:324-518 [33688]
Other proteins in same PDB: d1d9da2
protein/DNA complex; protein/RNA complex; complexed with mg, so4, zn
- Domain(s) for 1d9f:
Domain d1d9fa1: 1d9f A:324-518 [33691]
Other proteins in same PDB: d1d9fa2
protein/DNA complex; protein/RNA complex; complexed with so4, zn
- Domain(s) for 1dpi:
Domain d1dpia1: 1dpi A:326-518 [33692]
Other proteins in same PDB: d1dpia2
protein/DNA complex; complexed with zn
- Domain(s) for 1kfd:
Domain d1kfda1: 1kfd A:324-518 [33694]
Other proteins in same PDB: d1kfda2
protein/DNA complex; complexed with ctp
- Domain(s) for 1kfs:
Domain d1kfsa1: 1kfs A:324-518 [33681]
Other proteins in same PDB: d1kfsa2
protein/DNA complex; complexed with mg, zn; mutant
- Domain(s) for 1kln:
Domain d1klna1: 1kln A:324-518 [33693]
Other proteins in same PDB: d1klna2
protein/DNA complex; complexed with zn; mutant
- Domain(s) for 1krp:
Domain d1krpa1: 1krp A:324-518 [33685]
Other proteins in same PDB: d1krpa2
protein/DNA complex; complexed with zn; mutant
- Domain(s) for 1ksp:
Domain d1kspa1: 1ksp A:324-518 [33687]
Other proteins in same PDB: d1kspa2
protein/DNA complex; complexed with zn; mutant
- Domain(s) for 1qsl:
Domain d1qsla1: 1qsl A:324-518 [33686]
Other proteins in same PDB: d1qsla2
protein/DNA complex; complexed with eu
- Domain(s) for 2kfn:
Domain d2kfna1: 2kfn A:324-518 [33682]
Other proteins in same PDB: d2kfna2
protein/DNA complex; complexed with mg, mn, zn
- Domain(s) for 2kfz:
Domain d2kfza1: 2kfz A:324-518 [33683]
Other proteins in same PDB: d2kfza2
protein/DNA complex; complexed with mg, zn
- Domain(s) for 2kzm:
Domain d2kzma1: 2kzm A:324-518 [33690]
Other proteins in same PDB: d2kzma2
protein/DNA complex; complexed with mn, zn
- Domain(s) for 2kzz:
Domain d2kzza1: 2kzz A:324-518 [33689]
Other proteins in same PDB: d2kzza2
protein/DNA complex; complexed with zn
More info for Species Escherichia coli [TaxId:562] from c.55.3.5 Exonuclease domain of prokaryotic DNA polymerase
Timeline for Species Escherichia coli [TaxId:562] from c.55.3.5 Exonuclease domain of prokaryotic DNA polymerase:
- Species Escherichia coli [TaxId:562] from c.55.3.5 Exonuclease domain of prokaryotic DNA polymerase first appeared (with stable ids) in SCOP 1.55
- Species Escherichia coli [TaxId:562] from c.55.3.5 Exonuclease domain of prokaryotic DNA polymerase appears in SCOPe 2.03
- Species Escherichia coli [TaxId:562] from c.55.3.5 Exonuclease domain of prokaryotic DNA polymerase appears in SCOPe 2.05
- Species Escherichia coli [TaxId:562] from c.55.3.5 Exonuclease domain of prokaryotic DNA polymerase appears in the current release, SCOPe 2.08