Class c: Alpha and beta proteins (a/b) [51349] (147 folds) |
Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies) 3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest |
Superfamily c.55.3: Ribonuclease H-like [53098] (14 families) consists of one domain of this fold |
Family c.55.3.1: Ribonuclease H [53099] (4 proteins) |
BH0863-like Ribonuclease H [142490] (1 species) new class of RNase H |
Species Bacillus halodurans [TaxId:86665] [142491] (12 PDB entries) Uniprot Q9KEI9 61-193! Uniprot Q9KEI9 62-193 BH0863 |
Class II ribonuclease H (RNase HII) [53103] (5 species) |
Species Archaeon Archaeoglobus fulgidus [TaxId:2234] [64093] (2 PDB entries) |
Species Archaeon Methanococcus jannaschii [TaxId:2190] [53104] (1 PDB entry) |
Species Archaeon Pyrococcus horikoshii [TaxId:53953] [110639] (2 PDB entries) Uniprot O59351 |
Species Archaeon Thermococcus kodakaraensis [TaxId:311400] [64094] (2 PDB entries) |
Species Thermotoga maritima [TaxId:2336] [142489] (1 PDB entry) Uniprot Q9X017 1-221 |
HIV RNase H (Domain of reverse transcriptase) [53105] (2 species) |
Species Human immunodeficiency virus type 1 [TaxId:11676] [53106] (85 PDB entries) Uniprot P04585 159-692 # chain A coverage; chain B is shorter: 162-582 Uniprot P03366 186-725 # chain A coverage; chain B coverage: 156-584 Uniprot P04585 158-698 # chain A coverage; chain B is shorter: 159-595 Uniprot P04585 159-692 # chain A coverage; chain B is shorter: 162-582 ! Uniprot P03366 186-725 # chain A coverage; chain B coverage: 156-584 ! Uniprot P04585 158-698 # chain A coverage; chain B is shorter: 159-595 |
Species Human immunodeficiency virus type 2 [TaxId:11709] [82443] (1 PDB entry) |
RNase H (RNase HI) [53100] (3 species) |
Species Escherichia coli [TaxId:562] [53101] (30 PDB entries) Uniprot P0A7Y4 |
Species synthetic, Escherichia coli/Thermus thermophilus chimera [69532] (1 PDB entry) |
Species Thermus thermophilus [TaxId:274] [53102] (1 PDB entry) |
Timeline for Family c.55.3.1: Ribonuclease H: