SCOPe 2.06: Protein: Branched-chain alpha-keto acid dehydrogenase

Lineage for Protein: Branched-chain alpha-keto acid dehydrogenase

Root: SCOPe 2.06
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.48: TK C-terminal domain-like [52921] (1 superfamily)
3 layers: a/b/a; mixed beta-sheet of 5 strands, order 13245, strand 1 is antiparallel to the rest
Superfamily c.48.1: TK C-terminal domain-like [52922] (4 families)
Family c.48.1.2: Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain [52926] (5 proteins)
automatically mapped to Pfam PF02780
Protein Branched-chain alpha-keto acid dehydrogenase [52927] (2 species)

Species:

Human (Homo sapiens) [TaxId:9606] [52928] (23 PDB entries)
Uniprot P21953 52-392
1. Domain for 1dtw:
  - Domain d1dtwb2: 1dtw B:205-342 [33102]
    Other proteins in same PDB: d1dtwa_, d1dtwb1
    complexed with k, mg, tdp
2. Domain for 1ols:
  - Domain d1olsb2: 1ols B:205-342 [93333]
    Other proteins in same PDB: d1olsa_, d1olsb1
    complexed with gol, k, mn, tdp
3. Domain for 1olu:
  - Domain d1olub2: 1olu B:205-342 [93337]
    Other proteins in same PDB: d1olua_, d1olub1
    complexed with gol, k, mg, tdp
4. Domain for 1olx:
  - Domain d1olxb2: 1olx B:205-342 [93340]
    Other proteins in same PDB: d1olxa_, d1olxb1
    complexed with gol, k, mn, tdp
5. Domain for 1u5b:
  - Domain d1u5bb2: 1u5b B:205-342 [113036]
    Other proteins in same PDB: d1u5ba_, d1u5bb1
    complexed with gol, k, mn, tdp
6. Domain for 1v11:
  - Domain d1v11b2: 1v11 B:205-342 [108229]
    Other proteins in same PDB: d1v11a_, d1v11b1
    complexed with ben, cl, gol, k, mn, tdp
7. Domain for 1v16:
  - Domain d1v16b2: 1v16 B:205-342 [108242]
    Other proteins in same PDB: d1v16a_, d1v16b1
    complexed with ben, cl, gol, k, mn, tdp
8. Domain for 1v1m:
  - Domain d1v1mb2: 1v1m B:205-342 [108263]
    Other proteins in same PDB: d1v1ma_, d1v1mb1
    complexed with ben, cl, gol, k, mn, tdp
9. Domain for 1v1r:
  - Domain d1v1rb2: 1v1r B:205-342 [108274]
    Other proteins in same PDB: d1v1ra_, d1v1rb1
    complexed with cl, gol, k, na, so4
10. Domain for 1wci:
  - Domain d1wcib2: 1wci B:205-342 [120892]
    Other proteins in same PDB: d1wcia_, d1wcib1
    automated match to d1v16b2
    complexed with cl, gol, k, mn, wwf
11. Domain for 1x7w:
  - Domain d1x7wb2: 1x7w B:205-342 [114940]
    Other proteins in same PDB: d1x7wa_, d1x7wb1
    complexed with cl, gol, k, mn, tdp
12. Domain for 1x7x:
  - Domain d1x7xb2: 1x7x B:205-342 [114943]
    Other proteins in same PDB: d1x7xa_, d1x7xb1
    complexed with cl, gol, k, mn, tdp
13. Domain for 1x7y:
  - Domain d1x7yb2: 1x7y B:205-342 [114946]
    Other proteins in same PDB: d1x7ya_, d1x7yb1
    complexed with cl, gol, k, mn, tdp
14. Domain for 1x7z:
  - Domain d1x7zb2: 1x7z B:205-342 [114949]
    Other proteins in same PDB: d1x7za_, d1x7zb1
    complexed with cl, gol, k, mn, tdp
15. Domain for 1x80:
  - Domain d1x80b2: 1x80 B:205-342 [114952]
    Other proteins in same PDB: d1x80a_, d1x80b1
    complexed with cl, gol, k, mn, tdp
16. Domain for 2beu:
  - Domain d2beub2: 2beu B:205-342 [128391]
    Other proteins in same PDB: d2beua_, d2beub1
    automated match to d1v16b2
    complexed with cl, gol, k, mn, so4, thv
17. Domain for 2bev:
  - Domain d2bevb2: 2bev B:205-342 [128394]
    Other proteins in same PDB: d2beva_, d2bevb1
    automated match to d1v16b2
    complexed with cl, gol, k, mn, thy
18. Domain for 2bew:
  - Domain d2bewb2: 2bew B:205-342 [128397]
    Other proteins in same PDB: d2bewa_, d2bewb1
    automated match to d1v16b2
    complexed with cl, gol, k, mn, thw
19. Domain for 2bfb:
  - Domain d2bfbb2: 2bfb B:205-342 [197787]
    Other proteins in same PDB: d2bfba1, d2bfbb1
    automated match to d1x7yb2
    complexed with cl, gol, k, mn, mrd, tdp
20. Domain for 2bfc:
  - Domain d2bfcb2: 2bfc B:205-342 [128418]
    Other proteins in same PDB: d2bfca1, d2bfcb1
    automated match to d1v16b2
    complexed with gol, k, mn, tzd
21. Domain for 2bfd:
  - Domain d2bfdb2: 2bfd B:205-342 [128420]
    Other proteins in same PDB: d2bfda1, d2bfdb1
    automated match to d1v16b2
    complexed with cl, gol, k, mn, mpd, tdp
22. Domain for 2bfe:
  - Domain d2bfeb2: 2bfe B:205-342 [197789]
    Other proteins in same PDB: d2bfea1, d2bfeb1
    automated match to d1x7yb2
    complexed with cl, gol, k, mn, mrd, tdp
23. Domain for 2bff:
  - Domain d2bffb2: 2bff B:205-342 [128422]
    Other proteins in same PDB: d2bffa1, d2bffb1
    automated match to d1v16b2
    complexed with gol, k, mn, tzd
Thermus thermophilus [TaxId:274] [102468] (4 PDB entries)
1. Domains for 1um9:
  1. Domain d1um9b2: 1um9 B:188-324 [99583]
    Other proteins in same PDB: d1um9a_, d1um9b1, d1um9c_, d1um9d1
    complexed with so4
  2. Domain d1um9d2: 1um9 D:188-324 [99586]
    Other proteins in same PDB: d1um9a_, d1um9b1, d1um9c_, d1um9d1
    complexed with so4
2. Domains for 1umb:
  1. Domain d1umbb2: 1umb B:188-324 [99589]
    Other proteins in same PDB: d1umba_, d1umbb1, d1umbc_, d1umbd1
    complexed with mg, tdp
  2. Domain d1umbd2: 1umb D:188-324 [99592]
    Other proteins in same PDB: d1umba_, d1umbb1, d1umbc_, d1umbd1
    complexed with mg, tdp
3. Domains for 1umc:
  1. Domain d1umcb2: 1umc B:188-324 [99595]
    Other proteins in same PDB: d1umca_, d1umcb1, d1umcc_, d1umcd1
    complexed with 4mv, mg, tdp
  2. Domain d1umcd2: 1umc D:188-324 [99598]
    Other proteins in same PDB: d1umca_, d1umcb1, d1umcc_, d1umcd1
    complexed with 4mv, mg, tdp
4. Domains for 1umd:
  1. Domain d1umdb2: 1umd B:188-324 [99601]
    Other proteins in same PDB: d1umda_, d1umdb1, d1umdc_, d1umdd1
    complexed with coi, mg, tdp
  2. Domain d1umdd2: 1umd D:188-324 [99604]
    Other proteins in same PDB: d1umda_, d1umdb1, d1umdc_, d1umdd1
    complexed with coi, mg, tdp

More info for Protein Branched-chain alpha-keto acid dehydrogenase from c.48.1.2: Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain

Timeline for Protein Branched-chain alpha-keto acid dehydrogenase from c.48.1.2: Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain:

Protein Branched-chain alpha-keto acid dehydrogenase from c.48.1.2: Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain first appeared (with stable ids) in SCOP 1.55, called Protein Branched-chain alpha-keto acid dehydrogenase from c.48.1.2: Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-domain
Protein Branched-chain alpha-keto acid dehydrogenase from c.48.1.2: Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain appears in SCOPe 2.05
Protein Branched-chain alpha-keto acid dehydrogenase from c.48.1.2: Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain appears in SCOPe 2.07
Protein Branched-chain alpha-keto acid dehydrogenase from c.48.1.2: Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain appears in the current release, SCOPe 2.08