SCOPe 2.06: Protein: Transketolase (TK), C-domain

Lineage for Protein: Transketolase (TK), C-domain

Root: SCOPe 2.06
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.48: TK C-terminal domain-like [52921] (1 superfamily)
3 layers: a/b/a; mixed beta-sheet of 5 strands, order 13245, strand 1 is antiparallel to the rest
Superfamily c.48.1: TK C-terminal domain-like [52922] (4 families)
Family c.48.1.1: Transketolase C-terminal domain-like [52923] (2 proteins)
Protein Transketolase (TK), C-domain [52924] (4 species)
two N-terminal domains are PP and Pyr modules of thiamin-binding fold

Species:

Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [52925] (7 PDB entries)
1. Domains for 1ay0:
  1. Domain d1ay0a3: 1ay0 A:535-680 [33100]
    Other proteins in same PDB: d1ay0a1, d1ay0a2, d1ay0b1, d1ay0b2
    complexed with ca, tpp
  2. Domain d1ay0b3: 1ay0 B:535-680 [33101]
    Other proteins in same PDB: d1ay0a1, d1ay0a2, d1ay0b1, d1ay0b2
    complexed with ca, tpp
2. Domains for 1gpu:
  1. Domain d1gpua3: 1gpu A:535-680 [65456]
    Other proteins in same PDB: d1gpua1, d1gpua2, d1gpub1, d1gpub2
    complexed with ca, thd
  2. Domain d1gpub3: 1gpu B:535-680 [65459]
    Other proteins in same PDB: d1gpua1, d1gpua2, d1gpub1, d1gpub2
    complexed with ca, thd
3. Domains for 1ngs:
  1. Domain d1ngsa3: 1ngs A:535-680 [33098]
    Other proteins in same PDB: d1ngsa1, d1ngsa2, d1ngsb1, d1ngsb2
    complexed with ca, e4p, tpp
  2. Domain d1ngsb3: 1ngs B:535-680 [33099]
    Other proteins in same PDB: d1ngsa1, d1ngsa2, d1ngsb1, d1ngsb2
    complexed with ca, e4p, tpp
4. Domains for 1tka:
  1. Domain d1tkaa3: 1tka A:535-680 [33096]
    Other proteins in same PDB: d1tkaa1, d1tkaa2, d1tkab1, d1tkab2
    complexed with ca, n3t
  2. Domain d1tkab3: 1tka B:535-680 [33097]
    Other proteins in same PDB: d1tkaa1, d1tkaa2, d1tkab1, d1tkab2
    complexed with ca, n3t
5. Domains for 1tkb:
  1. Domain d1tkba3: 1tkb A:535-680 [33092]
    Other proteins in same PDB: d1tkba1, d1tkba2, d1tkbb1, d1tkbb2
    complexed with ca, n1t
  2. Domain d1tkbb3: 1tkb B:535-680 [33093]
    Other proteins in same PDB: d1tkba1, d1tkba2, d1tkbb1, d1tkbb2
    complexed with ca, n1t
6. Domains for 1tkc:
  1. Domain d1tkca3: 1tkc A:535-680 [33094]
    Other proteins in same PDB: d1tkca1, d1tkca2, d1tkcb1, d1tkcb2
    complexed with ca, m6t
  2. Domain d1tkcb3: 1tkc B:535-680 [33095]
    Other proteins in same PDB: d1tkca1, d1tkca2, d1tkcb1, d1tkcb2
    complexed with ca, m6t
7. Domains for 1trk:
  1. Domain d1trka3: 1trk A:535-680 [33090]
    Other proteins in same PDB: d1trka1, d1trka2, d1trkb1, d1trkb2
    complexed with ca, tpp
  2. Domain d1trkb3: 1trk B:535-680 [33091]
    Other proteins in same PDB: d1trka1, d1trka2, d1trkb1, d1trkb2
    complexed with ca, tpp
Escherichia coli [TaxId:562] [89712] (4 PDB entries)
1. Domains for 1qgd:
  1. Domain d1qgda3: 1qgd A:528-663 [88369]
    Other proteins in same PDB: d1qgda1, d1qgda2, d1qgdb1, d1qgdb2
    complexed with ca, so4, tpp
  2. Domain d1qgdb3: 1qgd B:528-663 [88372]
    Other proteins in same PDB: d1qgda1, d1qgda2, d1qgdb1, d1qgdb2
    complexed with ca, so4, tpp
2. Domains for 2r5n:
  1. Domain d2r5na3: 2r5n A:528-663 [151593]
    Other proteins in same PDB: d2r5na1, d2r5na2, d2r5na4, d2r5nb1, d2r5nb2, d2r5nb4
    automated match to d2r8oa3
    complexed with ca, edo, r5p, rp5, tpp
  2. Domain d2r5nb3: 2r5n B:528-663 [151596]
    Other proteins in same PDB: d2r5na1, d2r5na2, d2r5na4, d2r5nb1, d2r5nb2, d2r5nb4
    automated match to d2r8oa3
    complexed with ca, edo, r5p, rp5, tpp
3. Domains for 2r8o:
  1. Domain d2r8oa3: 2r8o A:528-663 [151733]
    Other proteins in same PDB: d2r8oa1, d2r8oa2, d2r8ob1, d2r8ob2, d2r8ob4
    automated match to d2r8oa3
    complexed with ca, edo, t5x
  2. Domain d2r8ob3: 2r8o B:528-663 [151736]
    Other proteins in same PDB: d2r8oa1, d2r8oa2, d2r8ob1, d2r8ob2, d2r8ob4
    automated match to d2r8ob3
    complexed with ca, edo, t5x
4. Domains for 2r8p:
  1. Domain d2r8pa3: 2r8p A:528-663 [151739]
    Other proteins in same PDB: d2r8pa1, d2r8pa2, d2r8pb1, d2r8pb2, d2r8pb4
    automated match to d2r8ob3
    complexed with ca, edo, t6f
  2. Domain d2r8pb3: 2r8p B:528-663 [151742]
    Other proteins in same PDB: d2r8pa1, d2r8pa2, d2r8pb1, d2r8pb2, d2r8pb4
    automated match to d2r8pb3
    complexed with ca, edo, t6f
Leishmania mexicana mexicana [TaxId:44270] [117610] (1 PDB entry)
Uniprot Q8MPM3
- Domains for 1r9j:
  1. Domain d1r9ja3: 1r9j A:527-669 [111724]
    Other proteins in same PDB: d1r9ja1, d1r9ja2, d1r9ja4, d1r9jb1, d1r9jb2, d1r9jb4
    complexed with ca, tpp
  2. Domain d1r9jb3: 1r9j B:527-669 [111727]
    Other proteins in same PDB: d1r9ja1, d1r9ja2, d1r9ja4, d1r9jb1, d1r9jb2, d1r9jb4
    complexed with ca, tpp
Maize (Zea mays) [TaxId:4577] [82430] (1 PDB entry)
- Domains for 1itz:
  1. Domain d1itza3: 1itz A:540-675 [76799]
    Other proteins in same PDB: d1itza1, d1itza2, d1itzb1, d1itzb2, d1itzc1, d1itzc2
    complexed with mg, tpp
  2. Domain d1itzb3: 1itz B:540-675 [76802]
    Other proteins in same PDB: d1itza1, d1itza2, d1itzb1, d1itzb2, d1itzc1, d1itzc2
    complexed with mg, tpp
  3. Domain d1itzc3: 1itz C:540-675 [76805]
    Other proteins in same PDB: d1itza1, d1itza2, d1itzb1, d1itzb2, d1itzc1, d1itzc2
    complexed with mg, tpp

More info for Protein Transketolase (TK), C-domain from c.48.1.1: Transketolase C-terminal domain-like

Timeline for Protein Transketolase (TK), C-domain from c.48.1.1: Transketolase C-terminal domain-like:

Protein Transketolase (TK), C-domain from c.48.1.1: Transketolase C-terminal domain-like first appeared (with stable ids) in SCOP 1.55, called Protein Transketolase from c.48.1.1: Transketolase
Protein Transketolase (TK), C-domain from c.48.1.1: Transketolase C-terminal domain-like appears in SCOPe 2.05
Protein Transketolase (TK), C-domain from c.48.1.1: Transketolase C-terminal domain-like appears in SCOPe 2.07
Protein Transketolase (TK), C-domain from c.48.1.1: Transketolase C-terminal domain-like appears in the current release, SCOPe 2.08