SCOPe 2.03: Species: Human hepatitis C virus (HCV), different isolates [TaxId: 11103]

Lineage for Species: Human hepatitis C virus (HCV), different isolates [TaxId: 11103]

Root: SCOPe 2.03
Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (25 families)
division into families based on beta-sheet topologies

Family c.37.1.14: RNA helicase [52724] (4 proteins)
duplication: consists of two similar domains, one binds NTP and the other binds RNA; also contains an all-alpha subdomain in the C-terminal extension

Protein HCV helicase domain [52725] (1 species)
Species Human hepatitis C virus (HCV), different isolates [TaxId:11103] [52726] (16 PDB entries)

PDB entries in Species: Human hepatitis C virus (HCV), different isolates [TaxId: 11103]:

Domain(s) for 1a1v:
1. Domain d1a1va1: 1a1v A:190-325 [32467]
  protein/DNA complex; protein/RNA complex; complexed with so4
2. Domain d1a1va2: 1a1v A:326-624 [32468]
  protein/DNA complex; protein/RNA complex; complexed with so4
Domain(s) for 1cu1:
1. Domain d1cu1a2: 1cu1 A:187-325 [32471]
  Other proteins in same PDB: d1cu1a1, d1cu1b1
  complexed with po4, zn
2. Domain d1cu1a3: 1cu1 A:326-631 [32472]
  Other proteins in same PDB: d1cu1a1, d1cu1b1
  complexed with po4, zn
3. Domain d1cu1b2: 1cu1 B:1187-1325 [32473]
  Other proteins in same PDB: d1cu1a1, d1cu1b1
  complexed with po4, zn
4. Domain d1cu1b3: 1cu1 B:1326-1631 [32474]
  Other proteins in same PDB: d1cu1a1, d1cu1b1
  complexed with po4, zn
Domain(s) for 1hei:
1. Domain d1heia1: 1hei A:187-325 [32463]
  complexed with ca
2. Domain d1heia2: 1hei A:326-629 [32464]
  complexed with ca
3. Domain d1heib1: 1hei B:188-325 [32465]
  complexed with ca
4. Domain d1heib2: 1hei B:326-628 [32466]
  complexed with ca
Domain(s) for 1jr6:
- Domain d1jr6a_: 1jr6 A: [71821]
  an engineered arginine-rich subdomain 2
Domain(s) for 1onb:
- Domain d1onba_: 1onb A: [87137]
  an engineered arginine-rich subdomain 2
Domain(s) for 3kqh:
1. Domain d3kqha1: 3kqh A:189-325 [212489]
  automated match to d1heia1
2. Domain d3kqha2: 3kqh A:326-624 [212490]
  automated match to d1heia2
3. Domain d3kqhb1: 3kqh B:189-325 [212491]
  automated match to d1heia1
4. Domain d3kqhb2: 3kqh B:326-624 [212492]
  automated match to d1heia2
Domain(s) for 3kqk:
1. Domain d3kqka1: 3kqk A:189-325 [212493]
  automated match to d1heia1
  protein/DNA complex
2. Domain d3kqka2: 3kqk A:326-624 [212494]
  automated match to d1heia2
  protein/DNA complex
3. Domain d3kqkb1: 3kqk B:189-325 [212495]
  automated match to d1heia1
  protein/DNA complex
4. Domain d3kqkb2: 3kqk B:326-624 [212496]
  automated match to d1heia2
  protein/DNA complex
Domain(s) for 3kql:
1. Domain d3kqla1: 3kql A:189-325 [212497]
  automated match to d1heia1
  protein/DNA complex; complexed with adp, alf, mg
2. Domain d3kqla2: 3kql A:326-625 [212498]
  automated match to d1heia2
  protein/DNA complex; complexed with adp, alf, mg
3. Domain d3kqlb1: 3kql B:189-325 [212499]
  automated match to d1heia1
  protein/DNA complex; complexed with adp, alf, mg
4. Domain d3kqlb2: 3kql B:326-625 [212500]
  automated match to d1heia2
  protein/DNA complex; complexed with adp, alf, mg
Domain(s) for 3kqn:
1. Domain d3kqna1: 3kqn A:189-325 [212501]
  automated match to d1heia1
  protein/DNA complex; complexed with adp, bef, mn
2. Domain d3kqna2: 3kqn A:326-625 [212502]
  automated match to d1heia2
  protein/DNA complex; complexed with adp, bef, mn
Domain(s) for 3kqu:
1. Domain d3kqua1: 3kqu A:189-325 [212503]
  automated match to d1heia1
  protein/DNA complex; complexed with adp, bef, mn
2. Domain d3kqua2: 3kqu A:326-625 [212504]
  automated match to d1heia2
  protein/DNA complex; complexed with adp, bef, mn
3. Domain d3kqub1: 3kqu B:189-325 [212505]
  automated match to d1heia1
  protein/DNA complex; complexed with adp, bef, mn
4. Domain d3kqub2: 3kqu B:326-625 [212506]
  automated match to d1heia2
  protein/DNA complex; complexed with adp, bef, mn
5. Domain d3kquc1: 3kqu C:189-325 [212507]
  automated match to d1heia1
  protein/DNA complex; complexed with adp, bef, mn
6. Domain d3kquc2: 3kqu C:326-625 [212508]
  automated match to d1heia2
  protein/DNA complex; complexed with adp, bef, mn
7. Domain d3kqud1: 3kqu D:189-325 [212509]
  automated match to d1heia1
  protein/DNA complex; complexed with adp, bef, mn
8. Domain d3kqud2: 3kqu D:326-625 [212510]
  automated match to d1heia2
  protein/DNA complex; complexed with adp, bef, mn
9. Domain d3kque1: 3kqu E:189-325 [212511]
  automated match to d1heia1
  protein/DNA complex; complexed with adp, bef, mn
10. Domain d3kque2: 3kqu E:326-625 [212512]
  automated match to d1heia2
  protein/DNA complex; complexed with adp, bef, mn
11. Domain d3kquf1: 3kqu F:189-325 [212513]
  automated match to d1heia1
  protein/DNA complex; complexed with adp, bef, mn
12. Domain d3kquf2: 3kqu F:326-625 [212514]
  automated match to d1heia2
  protein/DNA complex; complexed with adp, bef, mn
Domain(s) for 4ojq:
1. Domain d4ojqa1: 4ojq A:186-325 [237405]
  automated match to d1cu1a2
  complexed with 2sx, ca
2. Domain d4ojqa2: 4ojq A:326-630 [237406]
  automated match to d1cu1a3
  complexed with 2sx, ca
3. Domain d4ojqb1: 4ojq B:187-325 [237409]
  automated match to d1cu1a2
  complexed with 2sx, ca
4. Domain d4ojqb2: 4ojq B:326-628 [237410]
  automated match to d1cu1a3
  complexed with 2sx, ca
Domain(s) for 4ok3:
1. Domain d4ok3a1: 4ok3 A:187-325 [238286]
  automated match to d4ojqa1
  complexed with 2sy, ca
2. Domain d4ok3a2: 4ok3 A:326-629 [238287]
  automated match to d4ojqa2
  complexed with 2sy, ca
3. Domain d4ok3b1: 4ok3 B:187-325 [238284]
  automated match to d4ojqa1
  complexed with 2sy, ca
4. Domain d4ok3b2: 4ok3 B:326-628 [238285]
  automated match to d4ojqa2
  complexed with 2sy, ca
Domain(s) for 4ok5:
1. Domain d4ok5a1: 4ok5 A:184-325 [238292]
  automated match to d4ojqa1
  complexed with 2t2, ca
2. Domain d4ok5a2: 4ok5 A:326-629 [238293]
  automated match to d4ojqa2
  complexed with 2t2, ca
3. Domain d4ok5b1: 4ok5 B:187-325 [238294]
  automated match to d4ojqa1
  complexed with 2t2, ca
4. Domain d4ok5b2: 4ok5 B:326-629 [238295]
  automated match to d4ojqa2
  complexed with 2t2, ca
Domain(s) for 4ok6:
1. Domain d4ok6a1: 4ok6 A:185-325 [237407]
  automated match to d1cu1a2
  complexed with 2t7, ca
2. Domain d4ok6b1: 4ok6 B:187-325 [238288]
  automated match to d4ojqa1
  complexed with 2t7, ca
3. Domain d4ok6b2: 4ok6 B:326-627 [238289]
  automated match to d4ojqa2
  complexed with 2t7, ca
Domain(s) for 4oks:
1. Domain d4oksa1: 4oks A:184-325 [237408]
  automated match to d1cu1a2
  complexed with 2t9, ca
2. Domain d4oksb1: 4oks B:187-325 [238290]
  automated match to d4ojqa1
  complexed with 2t9, ca
3. Domain d4oksb2: 4oks B:326-630 [238291]
  automated match to d4ojqa2
  complexed with 2t9, ca
Domain(s) for 8ohm:
1. Domain d8ohma1: 8ohm A:190-325 [32469]
2. Domain d8ohma2: 8ohm A:326-624 [32470]

More info for Species Human hepatitis C virus (HCV), different isolates [TaxId:11103] from c.37.1.14 HCV helicase domain

Timeline for Species Human hepatitis C virus (HCV), different isolates [TaxId:11103] from c.37.1.14 HCV helicase domain:

Species Human hepatitis C virus (HCV), different isolates [TaxId:11103] from c.37.1.14 HCV helicase domain first appeared (with stable ids) in SCOP 1.55
Species Human hepatitis C virus (HCV), different isolates [TaxId:11103] from c.37.1.14 HCV helicase domain appears in SCOPe 2.02
Species Human hepatitis C virus (HCV), different isolates [TaxId:11103] from c.37.1.14 HCV helicase domain appears in SCOPe 2.04
Species Human hepatitis C virus (HCV), different isolates [TaxId:11103] from c.37.1.14 HCV helicase domain last appears in SCOPe 2.07