SCOPe 2.07: Protein: Nucleotide excision repair enzyme UvrB

Lineage for Protein: Nucleotide excision repair enzyme UvrB

Root: SCOPe 2.07
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families)
division into families based on beta-sheet topologies
Family c.37.1.19: Tandem AAA-ATPase domain [81268] (27 proteins)
duplication: tandem repeat of two RecA-like (AAA) domains
Protein Nucleotide excision repair enzyme UvrB [52708] (2 species)
contains large insertions in the first AAA domain

Species:

Bacillus caldotenax [TaxId:1395] [52710] (4 PDB entries)
Uniprot P56981
1. Domains for 1d9x:
  1. Domain d1d9xa1: 1d9x A:2-414 [32419]
    complexed with zn
  2. Domain d1d9xa2: 1d9x A:415-595 [32420]
    complexed with zn
2. Domains for 1d9z:
  1. Domain d1d9za1: 1d9z A:2-414 [32421]
    protein/DNA complex; complexed with atp, mg, zn
  2. Domain d1d9za2: 1d9z A:415-595 [32422]
    protein/DNA complex; complexed with atp, mg, zn
3. Domains for 1t5l:
  1. Domain d1t5la1: 1t5l A:2-414 [106455]
    complexed with zn; mutant
  2. Domain d1t5la2: 1t5l A:415-595 [106456]
    complexed with zn; mutant
  3. Domain d1t5lb1: 1t5l B:2-414 [106457]
    complexed with zn; mutant
  4. Domain d1t5lb2: 1t5l B:415-595 [106458]
    complexed with zn; mutant
4. Domains for 2fdc:
  1. Domain d2fdca1: 2fdc A:2-414 [133302]
    automatically matched to d1d9xa1
    protein/DNA complex; complexed with flq
  2. Domain d2fdca2: 2fdc A:415-594 [133303]
    automatically matched to d1d9xa2
    protein/DNA complex; complexed with flq
  3. Domain d2fdcb1: 2fdc B:2-414 [133304]
    automatically matched to d1d9xa1
    protein/DNA complex; complexed with flq
  4. Domain d2fdcb2: 2fdc B:415-593 [133305]
    automatically matched to d1d9xa2
    protein/DNA complex; complexed with flq
Thermus thermophilus [TaxId:274] [52709] (2 PDB entries)
1. Domains for 1c4o:
  1. Domain d1c4oa1: 1c4o A:2-409 [32415]
    complexed with bog, so4
  2. Domain d1c4oa2: 1c4o A:410-583 [32416]
    complexed with bog, so4
2. Domains for 1d2m:
  1. Domain d1d2ma1: 1d2m A:2-409 [32417]
    complexed with bog, so4
  2. Domain d1d2ma2: 1d2m A:410-583 [32418]
    complexed with bog, so4

More info for Protein Nucleotide excision repair enzyme UvrB from c.37.1.19: Tandem AAA-ATPase domain

Timeline for Protein Nucleotide excision repair enzyme UvrB from c.37.1.19: Tandem AAA-ATPase domain:

Protein Nucleotide excision repair enzyme UvrB from c.37.1.19: Tandem AAA-ATPase domain first appeared (with stable ids) in SCOP 1.55, called Protein Nucleotide excision repair enzyme UvrB from c.37.1.13: Extended AAA-ATPase domain
Protein Nucleotide excision repair enzyme UvrB from c.37.1.19: Tandem AAA-ATPase domain appears in SCOPe 2.06
Protein Nucleotide excision repair enzyme UvrB from c.37.1.19: Tandem AAA-ATPase domain does not appear in SCOPe 2.08