SCOP 1.71: Family c.37.1.12: ABC transporter ATPase domain-like

Lineage for Family c.37.1.12: ABC transporter ATPase domain-like

1. Root: SCOP 1.71

2. Class c: Alpha and beta proteins (a/b) [51349] (134 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (23 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.12: ABC transporter ATPase domain-like [52686] (19 proteins)
   there are two additional subdomains inserted into the central core that has a RecA-like topology

Proteins:

1. ABC transporter involved in vitamin B12 uptake, BtuD [75209] (1 species)

   • Species Escherichia coli [TaxId:562] [75210] (1 PDB entry)

2. ATP-binding subunit of the histidine permease [52687] (1 species)

   • Species Salmonella typhimurium [TaxId:90371] [52688] (1 PDB entry)

3. Branched chain aminoacid ABC transporter [75207] (1 species)

   • Species Thermotoga maritima, TM1139 [TaxId:2336] [75208] (1 PDB entry)

4. Cell division protein MukB [52695] (1 species)

   • Species Escherichia coli [TaxId:562] [52696] (1 PDB entry)

5. Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain [102378] (2 species)

   1. Species Human (Homo sapiens) [TaxId:9606] [117543] (2 PDB entries)

   2. Species Mouse (Mus musculus) [TaxId:10090] [102379] (8 PDB entries)

6. DNA repair protein MutS, the C-terminal domain [52697] (2 species)

   1. Species Escherichia coli [TaxId:562] [52699] (7 PDB entries)

   2. Species Thermus aquaticus [TaxId:271] [52698] (4 PDB entries)

7. Glucose transport protein GlcV, N-terminal domain [89681] (1 species)

   • Species Archaeon Sulfolobus solfataricus [TaxId:2287] [89682] (5 PDB entries)

8. Haemolysin B ATP-binding protein [89683] (1 species)

   • Species Escherichia coli [TaxId:562] [89684] (1 PDB entry)

9. Hypothetical protein PH0022, N-terminal domain [117546] (1 species)

   • Species Pyrococcus horikoshii [TaxId:70601] [117547] (2 PDB entries)

10. Maltose transport protein MalK, N-terminal domain [52689] (2 species)

    1. Species Archaeon Thermococcus litoralis [TaxId:2265] [52690] (1 PDB entry)

    2. Species Escherichia coli [TaxId:562] [102380] (3 PDB entries)

11. MJ0796 [64027] (1 species)

    • Species Archaeon Methanococcus jannaschii [TaxId:2190] [64028] (2 PDB entries)

12. MJ1267 [64025] (1 species)

    • Species Archaeon Methanococcus jannaschii [TaxId:2190] [64026] (3 PDB entries)

13. Multidrug resistance ABC transporter LmrA, C-terminal domain [102381] (1 species)

    • Species Lactococcus lactis [TaxId:1358] [102382] (1 PDB entry)

14. Multidrug resistance ABC transporter MsbA, C-terminal domain [89685] (1 species)
    a low-resolution structure of the E. coli MsbA in an open conformation is also available (f.35.1.1)

    • Species Vibrio cholerae [TaxId:666] [89686] (1 PDB entry)

15. Peptide transporter Tap1, C-terminal ABC domain [64029] (1 species)

    • Species Human (Homo sapiens) [TaxId:9606] [64030] (1 PDB entry)

16. Putative ABC transporter PF0895 [110560] (1 species)

    • Species Pyrococcus furiosus [TaxId:186497] [110561] (1 PDB entry)

17. Putative ABC transporter TM0544 [117548] (1 species)

    • Species Thermotoga maritima [TaxId:243274] [117549] (1 PDB entry)

18. Rad50 [52691] (1 species)

    • Species Archaeon Pyrococcus furiosus [TaxId:2261] [52692] (4 PDB entries)

19. Smc head domain [52693] (3 species)

    1. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [117544] (1 PDB entry)

    2. Species Pyrococcus furiosus [TaxId:186497] [117545] (2 PDB entries)

    3. Species Thermotoga maritima [TaxId:243274] [52694] (1 PDB entry)

More info for Family c.37.1.12: ABC transporter ATPase domain-like

Timeline for Family c.37.1.12: ABC transporter ATPase domain-like:

• Family c.37.1.12: ABC transporter ATPase domain-like first appeared (with stable ids) in SCOP 1.55
  
• Family c.37.1.12: ABC transporter ATPase domain-like appears in SCOP 1.69
  
• Family c.37.1.12: ABC transporter ATPase domain-like appears in SCOP 1.73
  
• Family c.37.1.12: ABC transporter ATPase domain-like appears in the current release, SCOPe 2.08