Lineage for Family c.37.1.11: RecA protein-like (ATPase-domain)

  1. Root: SCOPe 2.02
  2. 1143363Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 1162955Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 1162956Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (25 families) (S)
    division into families based on beta-sheet topologies
  5. 1165223Family c.37.1.11: RecA protein-like (ATPase-domain) [52670] (18 proteins)
    core: mixed beta-sheet of 8 strands, order 32451678; strand 7 is antiparallel to the rest

Proteins:

  1. 1165224Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU [52682] (1 species)
    lacks the last strand 8
  2. 1165232ATP:corrinoid adenosyltransferase CobA [52684] (1 species)
    lacks the two last strands
  3. 1165238Bacterial conjugative coupling protein TrwB [69492] (1 species)
  4. 1165276Cancer-related NTPase, C1orf57 [159566] (1 species)
    member of Pfam PF03266; DUF265
  5. 1165279Central domain of alpha subunit of F1 ATP synthase [88774] (4 species)
    1. 1165280Species Bacillus sp., strain ps3 [TaxId:1409] [88777] (1 PDB entry)
    2. 1165282Species Cow (Bos taurus) [TaxId:9913] [88775] (14 PDB entries)
      Uniprot P19483
    3. 1165325Species Norway rat (Rattus norvegicus) [TaxId:10116] [88776] (2 PDB entries)
    4. 1165328Species Spinach (Spinacia oleracea), chloroplast [TaxId:3562] [88778] (2 PDB entries)
  6. 1165331Central domain of beta subunit of F1 ATP synthase [88779] (4 species)
    1. 1165332Species Bacillus sp., strain ps3 [TaxId:1409] [88782] (1 PDB entry)
    2. 1165334Species Cow (Bos taurus) [TaxId:9913] [88780] (14 PDB entries)
      Uniprot P00829
    3. 1165377Species Norway rat (Rattus norvegicus) [TaxId:10116] [88781] (2 PDB entries)
    4. 1165380Species Spinach (Spinacia oleracea), chloroplast [TaxId:3562] [88783] (2 PDB entries)
  7. 1165383Circadian clock protein KaiC [110558] (1 species)
    duplication: contains two copies of this domain
  8. 1165421DNA repair protein Rad51, catalytic domain [82412] (4 species)
    1. 1165422Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [110554] (1 PDB entry)
      Uniprot P25454 81-395
    2. 1165429Species Human (Homo sapiens) [TaxId:9606] [82413] (1 PDB entry)
    3. 1165431Species Methanococcus voltae [TaxId:2188] [110555] (8 PDB entries)
      Uniprot O73948
    4. 1165440Species Pyrococcus furiosus [TaxId:2261] [102377] (1 PDB entry)
  9. 1165448Extracellular secretion NTPase EpsE [102375] (1 species)
    type II/IV secretion system protein; overall structure is similar to HP0525
  10. 1165452Gene 4 protein (g4p, DNA primase), helicase domain [52674] (1 species)
  11. 1165477Hexameric replicative helicase repA [52676] (1 species)
  12. 1165496Hexameric traffic ATPase, HP0525 [52719] (1 species)
    type II/IV secretion system protein; includes N-terminal alpha+beta domain of a profilin-like topology
  13. 1165516Hypothetical kinase-like protein Aq_1292 [142301] (1 species)
    member of Pfam PF03266 (DUF265)
  14. 1165519Meiotic recombination protein DMC1/LIM15 homolog [110556] (1 species)
  15. 1165523NTPase P4 [117541] (1 species)
    contains extra N-terminal subdomain (~100 residues): [contains pseudo beta-barrel]
  16. 1165570RecA protein, ATPase-domain [52671] (4 species)
    C-terminal domain is alpha+beta
    1. 1165571Species Deinococcus radiodurans [TaxId:1299] [117540] (1 PDB entry)
      Uniprot P42443 15-341
    2. 1165573Species Escherichia coli [TaxId:562] [52672] (7 PDB entries)
      Uniprot P0A7G6 P03017
    3. 1165581Species Mycobacterium smegmatis [TaxId:1772] [89675] (4 PDB entries)
    4. 1165586Species Mycobacterium tuberculosis [TaxId:1773] [52673] (6 PDB entries)
  17. 1165593Transcription termination factor Rho, ATPase domain [89676] (1 species)
  18. 1165625automated matches [190393] (3 species)
    not a true protein
    1. 1165626Species Homo sapiens [TaxId:9606] [196788] (1 PDB entry)
    2. 1165628Species Pseudomonas phage [TaxId:161736] [188308] (4 PDB entries)
    3. 1165641Species Salmonella enterica [TaxId:99287] [194072] (1 PDB entry)

More info for Family c.37.1.11: RecA protein-like (ATPase-domain)

Timeline for Family c.37.1.11: RecA protein-like (ATPase-domain):