Lineage for Species: Rat (Rattus norvegicus)
- Root: SCOP 1.65
Class c: Alpha and beta proteins (a/b) [51349] (121 folds) 
Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
3 layers: a/b/a, parallel or mixed beta-sheets of variable sizesSuperfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (21 families) 
division into families based on beta-sheet topologies
Family c.37.1.8: G proteins [52592] (35 proteins)
core: mixed beta-sheet of 6 strands, order 231456; strand 2 is antiparallel to the rest
Protein Transducin (alpha subunit) [52623] (2 species)
common fold is interrupted with an all-alpha domainSpecies Rat (Rattus norvegicus) [TaxId:10116] [52625] (18 PDB entries)
PDB entries in Species: Rat (Rattus norvegicus):
- Domain(s) for 1agr:
Domain d1agra2: 1agr A:5-60,A:182-354 [32111]
Other proteins in same PDB: d1agra1, d1agrd1, d1agre_, d1agrh_
Domain d1agrd2: 1agr D:11-60,D:182-354 [32112]
Other proteins in same PDB: d1agra1, d1agrd1, d1agre_, d1agrh_
complexed with alf, cit, gdp, mg
- Domain(s) for 1as0:
Domain d1as0_2: 1as0 32-60,182-344 [32095]
Other proteins in same PDB: d1as0_1
complexed with gsp, mg, so4; mutant
- Domain(s) for 1as2:
Domain d1as2_2: 1as2 32-60,182-346 [32110]
Other proteins in same PDB: d1as2_1
complexed with gdp, po4; mutant
- Domain(s) for 1as3:
Domain d1as3_2: 1as3 9-60,182-354 [32107]
Other proteins in same PDB: d1as3_1
complexed with gdp, so4; mutant
- Domain(s) for 1bh2:
Domain d1bh2_2: 1bh2 32-60,182-346 [32097]
Other proteins in same PDB: d1bh2_1
complexed with gsp, mg; mutant
- Domain(s) for 1bof:
Domain d1bof_2: 1bof 10-60,182-354 [32100]
Other proteins in same PDB: d1bof_1
complexed with gdp, mg, so4
- Domain(s) for 1cip:
Domain d1cipa2: 1cip A:32-60,A:182-347 [32093]
Other proteins in same PDB: d1cipa1
complexed with gnp, mg
- Domain(s) for 1fqj:
- Domain(s) for 1fqk:
Domain d1fqka2: 1fqk A:28-60,A:182-345 [32103]
Other proteins in same PDB: d1fqka1, d1fqkb_, d1fqkc1, d1fqkd_
Domain d1fqkc2: 1fqk C:29-60,C:182-345 [32104]
Other proteins in same PDB: d1fqka1, d1fqkb_, d1fqkc1, d1fqkd_
species chimera
complexed with alf, gdp, mg
- Domain(s) for 1gdd:
Domain d1gdd_2: 1gdd 9-60,182-354 [32101]
Other proteins in same PDB: d1gdd_1
complexed with gdp, so4
- Domain(s) for 1gfi:
Domain d1gfi_2: 1gfi 33-60,182-345 [32102]
Other proteins in same PDB: d1gfi_1
complexed with alf, gdp, mg
- Domain(s) for 1gg2:
Domain d1gg2a2: 1gg2 A:5-60,A:182-348 [32109]
Other proteins in same PDB: d1gg2a1, d1gg2b_, d1gg2g_
complexed with gdp; mutant
- Domain(s) for 1gia:
Domain d1gia_2: 1gia 34-60,182-343 [32094]
Other proteins in same PDB: d1gia_1
complexed with gsp, mg
- Domain(s) for 1gil:
Domain d1gil_2: 1gil 34-60,182-343 [32106]
Other proteins in same PDB: d1gil_1
complexed with gsp, mg; mutant
- Domain(s) for 1git:
Domain d1git_2: 1git 32-60,182-348 [32105]
Other proteins in same PDB: d1git_1
complexed with gdp, po4; mutant
- Domain(s) for 1got:
Domain d1gota2: 1got A:6-60,A:182-343 [32096]
Other proteins in same PDB: d1gota1, d1gotb_, d1gotg_
species chimera
complexed with gdp
- Domain(s) for 1gp2:
Domain d1gp2a2: 1gp2 A:5-60,A:182-348 [32108]
Other proteins in same PDB: d1gp2a1, d1gp2b_, d1gp2g_
complexed with gdp; mutant
- Domain(s) for 1kjy:
Domain d1kjya2: 1kjy A:30-60,A:182-349 [72625]
Other proteins in same PDB: d1kjya1, d1kjyc1
Domain d1kjyc2: 1kjy C:1030-1060,C:1182-1347 [72627]
Other proteins in same PDB: d1kjya1, d1kjyc1
bound to the goloco motif of rgs14, chains B and D
complexed with cs, gdp, mg
More info for Species Rat (Rattus norvegicus) [TaxId:10116] from c.37.1.8 Transducin (alpha subunit)
Timeline for Species Rat (Rattus norvegicus) [TaxId:10116] from c.37.1.8 Transducin (alpha subunit):
- Species Rat (Rattus norvegicus) [TaxId:10116] from c.37.1.8 Transducin (alpha subunit) first appeared (with stable ids) in SCOP 1.55
- Species Rat (Rattus norvegicus) [TaxId:10116] from c.37.1.8 Transducin (alpha subunit) appears in SCOP 1.63
- Species Rat (Rattus norvegicus) [TaxId:10116] from c.37.1.8 Transducin (alpha subunit) appears in SCOP 1.67
- Species Rat (Rattus norvegicus) [TaxId:10116] from c.37.1.8 Transducin (alpha subunit) appears in the current release, SCOPe 2.08, called Species Norway rat (Rattus norvegicus) [TaxId:10116] from c.37.1.8 Transducin (alpha subunit)