SCOPe 2.08: Protein: GMP synthetase, central domain

Lineage for Protein: GMP synthetase, central domain

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.26: Adenine nucleotide alpha hydrolase-like [52373] (3 superfamilies)
core: 3 layers, a/b/a ; parallel beta-sheet of 5 strands, order 32145

Superfamily c.26.2: Adenine nucleotide alpha hydrolases-like [52402] (7 families)

share similar mode of ligand (Adenosine group) binding
can be subdivided into two group with closer relationships within each group than between the groups; the first three families form one group whereas the last two families form the other group

Family c.26.2.1: N-type ATP pyrophosphatases [52403] (9 proteins)
Protein GMP synthetase, central domain [52404] (2 species)

Species:

Escherichia coli [TaxId:562] [52405] (1 PDB entry)
- Domains for 1gpm:
  1. Domain d1gpma1: 1gpm A:208-404 [31608]
    Other proteins in same PDB: d1gpma2, d1gpma3, d1gpmb2, d1gpmb3, d1gpmc2, d1gpmc3, d1gpmd2, d1gpmd3
    complexed with amp, cit, mg, po4, pop
  2. Domain d1gpmb1: 1gpm B:208-404 [31609]
    Other proteins in same PDB: d1gpma2, d1gpma3, d1gpmb2, d1gpmb3, d1gpmc2, d1gpmc3, d1gpmd2, d1gpmd3
    complexed with amp, cit, mg, po4, pop
  3. Domain d1gpmc1: 1gpm C:208-404 [31610]
    Other proteins in same PDB: d1gpma2, d1gpma3, d1gpmb2, d1gpmb3, d1gpmc2, d1gpmc3, d1gpmd2, d1gpmd3
    complexed with amp, cit, mg, po4, pop
  4. Domain d1gpmd1: 1gpm D:208-404 [31611]
    Other proteins in same PDB: d1gpma2, d1gpma3, d1gpmb2, d1gpmb3, d1gpmc2, d1gpmc3, d1gpmd2, d1gpmd3
    complexed with amp, cit, mg, po4, pop
Thermus thermophilus HB8 [TaxId:300852] [255716] (2 PDB entries)
1. Domains for 2ywb:
  1. Domain d2ywba2: 2ywb A:190-382 [244845]
    Other proteins in same PDB: d2ywba1, d2ywba3, d2ywbb1, d2ywbb3, d2ywbc1, d2ywbc3, d2ywbd1, d2ywbd3
    automated match to d1gpma1
  2. Domain d2ywbb2: 2ywb B:190-382 [244848]
    Other proteins in same PDB: d2ywba1, d2ywba3, d2ywbb1, d2ywbb3, d2ywbc1, d2ywbc3, d2ywbd1, d2ywbd3
    automated match to d1gpma1
  3. Domain d2ywbc2: 2ywb C:190-382 [244851]
    Other proteins in same PDB: d2ywba1, d2ywba3, d2ywbb1, d2ywbb3, d2ywbc1, d2ywbc3, d2ywbd1, d2ywbd3
    automated match to d1gpma1
  4. Domain d2ywbd2: 2ywb D:190-382 [244854]
    Other proteins in same PDB: d2ywba1, d2ywba3, d2ywbb1, d2ywbb3, d2ywbc1, d2ywbc3, d2ywbd1, d2ywbd3
    automated match to d1gpma1
2. Domains for 2ywc:
  1. Domain d2ywca2: 2ywc A:190-382 [244857]
    Other proteins in same PDB: d2ywca1, d2ywca3, d2ywcb1, d2ywcb3, d2ywcc1, d2ywcc3, d2ywcd1, d2ywcd3
    automated match to d1gpma1
    complexed with xmp
  2. Domain d2ywcb2: 2ywc B:190-382 [244860]
    Other proteins in same PDB: d2ywca1, d2ywca3, d2ywcb1, d2ywcb3, d2ywcc1, d2ywcc3, d2ywcd1, d2ywcd3
    automated match to d1gpma1
    complexed with xmp
  3. Domain d2ywcc2: 2ywc C:190-382 [244863]
    Other proteins in same PDB: d2ywca1, d2ywca3, d2ywcb1, d2ywcb3, d2ywcc1, d2ywcc3, d2ywcd1, d2ywcd3
    automated match to d1gpma1
    complexed with xmp
  4. Domain d2ywcd2: 2ywc D:190-382 [244866]
    Other proteins in same PDB: d2ywca1, d2ywca3, d2ywcb1, d2ywcb3, d2ywcc1, d2ywcc3, d2ywcd1, d2ywcd3
    automated match to d1gpma1
    complexed with xmp

More info for Protein GMP synthetase, central domain from c.26.2.1: N-type ATP pyrophosphatases

Timeline for Protein GMP synthetase, central domain from c.26.2.1: N-type ATP pyrophosphatases:

Protein GMP synthetase, central domain from c.26.2.1: N-type ATP pyrophosphatases first appeared (with stable ids) in SCOP 1.55
Protein GMP synthetase, central domain from c.26.2.1: N-type ATP pyrophosphatases appears in SCOPe 2.07