SCOPe 2.07: Family c.14.1.1: Clp protease, ClpP subunit

Lineage for Family c.14.1.1: Clp protease, ClpP subunit

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.14: ClpP/crotonase [52095] (1 superfamily)
   core: 4 turns of (beta-beta-alpha)n superhelix

4. Superfamily c.14.1: ClpP/crotonase [52096] (5 families)

5. Family c.14.1.1: Clp protease, ClpP subunit [52097] (2 proteins)
   automatically mapped to Pfam PF00574

Proteins:

1. Clp protease, ClpP subunit [52098] (10 species)

   1. Species Bacillus subtilis [TaxId:1423] [190014] (2 PDB entries)

   2. Species Escherichia coli [TaxId:562] [52099] (1 PDB entry)

   3. Species Helicobacter pylori [TaxId:210] [188429] (4 PDB entries)

   4. Species Human (Homo sapiens), mitochondrial [TaxId:9606] [141995] (3 PDB entries)
      Uniprot Q16740 57-249

   5. Species Listeria monocytogenes [TaxId:1639] [311108] (1 PDB entry)

   6. Species Malaria parasite (Plasmodium falciparum) [TaxId:5833] [141996] (1 PDB entry)
      Uniprot O97252 177-366

   7. Species Mycobacterium tuberculosis [TaxId:1773] [141997] (1 PDB entry)
      Uniprot P0A526 15-193

   8. Species Pneumococcus (Streptococcus pneumoniae) [TaxId:1313] [141998] (1 PDB entry)
      Uniprot P63788 2-193

   9. Species Staphylococcus aureus [TaxId:196620] [189881] (4 PDB entries)

   10. Species Staphylococcus aureus [TaxId:273036] [388880] (1 PDB entry)

2. automated matches [190149] (15 species)
   not a true protein

   1. Species Bacillus subtilis [TaxId:1423] [189283] (5 PDB entries)

   2. Species Coxiella burnetii [TaxId:360115] [189606] (1 PDB entry)

   3. Species Enterococcus faecium [TaxId:1352] [352041] (1 PDB entry)

   4. Species Escherichia coli K-12 [TaxId:83333] [196414] (1 PDB entry)

   5. Species Escherichia coli [TaxId:562] [186874] (4 PDB entries)

   6. Species Escherichia coli [TaxId:83333] [376807] (5 PDB entries)

   7. Species Francisella tularensis [TaxId:177416] [189492] (1 PDB entry)

   8. Species Francisella tularensis [TaxId:263] [324166] (3 PDB entries)

   9. Species Listeria monocytogenes [TaxId:169963] [197321] (1 PDB entry)

   10. Species Neisseria meningitidis [TaxId:487] [376758] (5 PDB entries)

   11. Species Peptoclostridium difficile [TaxId:272563] [360251] (1 PDB entry)

   12. Species Staphylococcus aureus [TaxId:1280] [279588] (2 PDB entries)

   13. Species Staphylococcus aureus [TaxId:273036] [390692] (1 PDB entry)

   14. Species Staphylococcus aureus [TaxId:93061] [189958] (9 PDB entries)

   15. Species Xanthomonas oryzae [TaxId:347] [404983] (1 PDB entry)

More info for Family c.14.1.1: Clp protease, ClpP subunit

Timeline for Family c.14.1.1: Clp protease, ClpP subunit:

• Family c.14.1.1: Clp protease, ClpP subunit first appeared (with stable ids) in SCOP 1.55
  
• Family c.14.1.1: Clp protease, ClpP subunit appears in SCOPe 2.06
  
• Family c.14.1.1: Clp protease, ClpP subunit appears in the current release, SCOPe 2.08