Lineage for Species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

  1. Root: SCOP 1.73
  2. 681097Class c: Alpha and beta proteins (a/b) [51349] (141 folds)
  3. 690278Fold c.10: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) [52046] (3 superfamilies)
    2 curved layers, a/b; parallel beta-sheet; order 1234...N; there are sequence similarities between different superfamilies
  4. 690279Superfamily c.10.1: RNI-like [52047] (3 families) (S)
    regular structure consisting of similar repeats
  5. 690299Family c.10.1.2: Rna1p (RanGAP1), N-terminal domain [52052] (1 protein)
    this is a repeat family; one repeat unit is 1k5d C:168-196 found in domain
  6. 690300Protein Rna1p (RanGAP1), N-terminal domain [52053] (1 species)
    GTPase-activating protein for SpI1, ortologue of Ran
    duplication: consists of 11 repeats
  7. 690301Species Fission yeast (Schizosaccharomyces pombe) [TaxId:4896] [52054] (4 PDB entries)

PDB entries in Species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]:

  1. Domain(s) for 1k5d:
    1. 690306Domain d1k5dc_: 1k5d C: [68170]
      Other proteins in same PDB: d1k5da_, d1k5db_, d1k5dd_, d1k5de_, d1k5dg_, d1k5dh_, d1k5dj_, d1k5dk_
    2. 690307Domain d1k5df_: 1k5d F: [68173]
      Other proteins in same PDB: d1k5da_, d1k5db_, d1k5dd_, d1k5de_, d1k5dg_, d1k5dh_, d1k5dj_, d1k5dk_
    3. 690308Domain d1k5di_: 1k5d I: [68176]
      Other proteins in same PDB: d1k5da_, d1k5db_, d1k5dd_, d1k5de_, d1k5dg_, d1k5dh_, d1k5dj_, d1k5dk_
    4. 690309Domain d1k5dl_: 1k5d L: [68179]
      Other proteins in same PDB: d1k5da_, d1k5db_, d1k5dd_, d1k5de_, d1k5dg_, d1k5dh_, d1k5dj_, d1k5dk_
      complexed with gnp, mg; mutant
  2. Domain(s) for 1k5g:
    1. 690310Domain d1k5gc_: 1k5g C: [68182]
      Other proteins in same PDB: d1k5ga_, d1k5gb_, d1k5gd_, d1k5ge_, d1k5gg_, d1k5gh_, d1k5gj_, d1k5gk_
    2. 690311Domain d1k5gf_: 1k5g F: [68185]
      Other proteins in same PDB: d1k5ga_, d1k5gb_, d1k5gd_, d1k5ge_, d1k5gg_, d1k5gh_, d1k5gj_, d1k5gk_
    3. 690312Domain d1k5gi_: 1k5g I: [68188]
      Other proteins in same PDB: d1k5ga_, d1k5gb_, d1k5gd_, d1k5ge_, d1k5gg_, d1k5gh_, d1k5gj_, d1k5gk_
    4. 690313Domain d1k5gl_: 1k5g L: [68191]
      Other proteins in same PDB: d1k5ga_, d1k5gb_, d1k5gd_, d1k5ge_, d1k5gg_, d1k5gh_, d1k5gj_, d1k5gk_
      complexed with af3, gdp, mg; mutant
  3. Domain(s) for 1yrg:
    1. 690304Domain d1yrga_: 1yrg A: [30854]
    2. 690305Domain d1yrgb_: 1yrg B: [30855]
      mutant
  4. Domain(s) for 2ca6:
    1. 690302Domain d2ca6a1: 2ca6 A:2-345 [130151]
      automatically matched to d1k5dc_
      complexed with so4
    2. 690303Domain d2ca6b1: 2ca6 B:2-345 [130152]
      automatically matched to d1k5dc_
      complexed with so4

More info for Species Fission yeast (Schizosaccharomyces pombe) [TaxId:4896] from c.10.1.2 Rna1p (RanGAP1), N-terminal domain

Timeline for Species Fission yeast (Schizosaccharomyces pombe) [TaxId:4896] from c.10.1.2 Rna1p (RanGAP1), N-terminal domain: