SCOP 1.63: Species: Bacillus stearothermophilus, nca 1503

Lineage for Species: Bacillus stearothermophilus, nca 1503

Root: SCOP 1.63
Class c: Alpha and beta proteins (a/b) [51349] (117 folds)

Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
The nucleotide-binding modes of this and the next two folds/superfamilies are similar

Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (10 families)
Family c.2.1.3: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain [51800] (12 proteins)
family members also share a common alpha+beta fold in C-terminal domain
Protein Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) [51801] (13 species)
Species Bacillus stearothermophilus, nca 1503 [TaxId:1422] [51803] (6 PDB entries)

PDB entries in Species: Bacillus stearothermophilus, nca 1503:

Domain(s) for 1dbv:
1. Domain d1dbvo1: 1dbv O:0-148,O:313-333 [29966]
  Other proteins in same PDB: d1dbvo2, d1dbvp2, d1dbvq2, d1dbvr2
2. Domain d1dbvp1: 1dbv P:0-148,P:313-333 [29967]
  Other proteins in same PDB: d1dbvo2, d1dbvp2, d1dbvq2, d1dbvr2
3. Domain d1dbvq1: 1dbv Q:0-148,Q:313-333 [29968]
  Other proteins in same PDB: d1dbvo2, d1dbvp2, d1dbvq2, d1dbvr2
4. Domain d1dbvr1: 1dbv R:0-148,R:313-333 [29969]
  Other proteins in same PDB: d1dbvo2, d1dbvp2, d1dbvq2, d1dbvr2
  complexed with nad, so4; mutant
Domain(s) for 1gd1:
1. Domain d1gd1o1: 1gd1 O:0-148,O:313-333 [29962]
  Other proteins in same PDB: d1gd1o2, d1gd1p2, d1gd1q2, d1gd1r2
2. Domain d1gd1p1: 1gd1 P:0-148,P:313-333 [29963]
  Other proteins in same PDB: d1gd1o2, d1gd1p2, d1gd1q2, d1gd1r2
3. Domain d1gd1q1: 1gd1 Q:0-148,Q:313-333 [29964]
  Other proteins in same PDB: d1gd1o2, d1gd1p2, d1gd1q2, d1gd1r2
4. Domain d1gd1r1: 1gd1 R:0-148,R:313-333 [29965]
  Other proteins in same PDB: d1gd1o2, d1gd1p2, d1gd1q2, d1gd1r2
  complexed with nad, so4
Domain(s) for 2dbv:
1. Domain d2dbvo1: 2dbv O:0-148,O:313-333 [29970]
  Other proteins in same PDB: d2dbvo2, d2dbvp2, d2dbvq2, d2dbvr2
2. Domain d2dbvp1: 2dbv P:0-148,P:313-333 [29971]
  Other proteins in same PDB: d2dbvo2, d2dbvp2, d2dbvq2, d2dbvr2
3. Domain d2dbvq1: 2dbv Q:0-148,Q:313-333 [29972]
  Other proteins in same PDB: d2dbvo2, d2dbvp2, d2dbvq2, d2dbvr2
4. Domain d2dbvr1: 2dbv R:0-148,R:313-333 [29973]
  Other proteins in same PDB: d2dbvo2, d2dbvp2, d2dbvq2, d2dbvr2
  complexed with ndp, so4; mutant
Domain(s) for 2gd1:
1. Domain d2gd1o1: 2gd1 O:0-148,O:313-333 [29978]
  Other proteins in same PDB: d2gd1o2, d2gd1p2, d2gd1q2, d2gd1r2
2. Domain d2gd1p1: 2gd1 P:0-148,P:313-333 [29979]
  Other proteins in same PDB: d2gd1o2, d2gd1p2, d2gd1q2, d2gd1r2
3. Domain d2gd1q1: 2gd1 Q:0-148,Q:313-333 [29980]
  Other proteins in same PDB: d2gd1o2, d2gd1p2, d2gd1q2, d2gd1r2
4. Domain d2gd1r1: 2gd1 R:0-148,R:313-333 [29981]
  Other proteins in same PDB: d2gd1o2, d2gd1p2, d2gd1q2, d2gd1r2
  complexed with so4
Domain(s) for 3dbv:
1. Domain d3dbvo1: 3dbv O:0-148,O:313-333 [29982]
  Other proteins in same PDB: d3dbvo2, d3dbvp2, d3dbvq2, d3dbvr2
2. Domain d3dbvp1: 3dbv P:0-148,P:313-333 [29983]
  Other proteins in same PDB: d3dbvo2, d3dbvp2, d3dbvq2, d3dbvr2
3. Domain d3dbvq1: 3dbv Q:0-148,Q:313-333 [29984]
  Other proteins in same PDB: d3dbvo2, d3dbvp2, d3dbvq2, d3dbvr2
4. Domain d3dbvr1: 3dbv R:0-148,R:313-333 [29985]
  Other proteins in same PDB: d3dbvo2, d3dbvp2, d3dbvq2, d3dbvr2
  complexed with nad, so4; mutant
Domain(s) for 4dbv:
1. Domain d4dbvo1: 4dbv O:0-148,O:313-333 [29974]
  Other proteins in same PDB: d4dbvo2, d4dbvp2, d4dbvq2, d4dbvr2
2. Domain d4dbvp1: 4dbv P:0-148,P:313-333 [29975]
  Other proteins in same PDB: d4dbvo2, d4dbvp2, d4dbvq2, d4dbvr2
3. Domain d4dbvq1: 4dbv Q:0-148,Q:313-333 [29976]
  Other proteins in same PDB: d4dbvo2, d4dbvp2, d4dbvq2, d4dbvr2
4. Domain d4dbvr1: 4dbv R:0-148,R:313-333 [29977]
  Other proteins in same PDB: d4dbvo2, d4dbvp2, d4dbvq2, d4dbvr2
  complexed with ndp, so4; mutant

More info for Species Bacillus stearothermophilus, nca 1503 [TaxId:1422] from c.2.1.3 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)

Timeline for Species Bacillus stearothermophilus, nca 1503 [TaxId:1422] from c.2.1.3 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH):

Species Bacillus stearothermophilus, nca 1503 [TaxId:1422] from c.2.1.3 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) first appeared (with stable ids) in SCOP 1.55
Species Bacillus stearothermophilus, nca 1503 [TaxId:1422] from c.2.1.3 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) appears in SCOP 1.61
Species Bacillus stearothermophilus, nca 1503 [TaxId:1422] from c.2.1.3 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) appears in SCOP 1.65
Species Bacillus stearothermophilus, nca 1503 [TaxId:1422] from c.2.1.3 Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) appears in the current release, SCOPe 2.08