SCOP 1.69: Protein: 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase)

Lineage for Protein: 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase)

Root: SCOP 1.69
Class c: Alpha and beta proteins (a/b) [51349] (136 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (31 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.10: Aldolase [51569] (6 families)
Common fold covers whole protein structure
Family c.1.10.4: Class I DAHP synthetase [51599] (2 proteins)
Protein 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) [51602] (3 species)

Species:

Aquifex aeolicus [TaxId:63363] [63922] (16 PDB entries)
1. Domains for 1fwn:
  1. Domain d1fwna_: 1fwn A: [60060]
  2. Domain d1fwnb_: 1fwn B: [60061]
2. Domains for 1fws:
  1. Domain d1fwsa_: 1fws A: [60063]
  2. Domain d1fwsb_: 1fws B: [60064]
3. Domains for 1fwt:
  1. Domain d1fwta_: 1fwt A: [60065]
  2. Domain d1fwtb_: 1fwt B: [60066]
4. Domains for 1fww:
  1. Domain d1fwwa_: 1fww A: [60067]
  2. Domain d1fwwb_: 1fww B: [60068]
5. Domains for 1fx6:
  1. Domain d1fx6a_: 1fx6 A: [60086]
  2. Domain d1fx6b_: 1fx6 B: [60087]
6. Domains for 1fxp:
  1. Domain d1fxpa_: 1fxp A: [60106]
  2. Domain d1fxpb_: 1fxp B: [60107]
7. Domains for 1fxq:
  1. Domain d1fxqa_: 1fxq A: [60108]
  2. Domain d1fxqb_: 1fxq B: [60109]
8. Domains for 1fy6:
  1. Domain d1fy6a_: 1fy6 A: [60111]
  2. Domain d1fy6b_: 1fy6 B: [60112]
9. Domains for 1jcx:
  1. Domain d1jcxa_: 1jcx A: [66510]
  2. Domain d1jcxb_: 1jcx B: [66511]
10. Domains for 1jcy:
  1. Domain d1jcya_: 1jcy A: [66512]
  2. Domain d1jcyb_: 1jcy B: [66513]
11. Domains for 1lrn:
  1. Domain d1lrna_: 1lrn A: [78159]
  2. Domain d1lrnb_: 1lrn B: [78160]
12. Domains for 1lro:
  1. Domain d1lroa_: 1lro A: [78161]
  2. Domain d1lrob_: 1lro B: [78162]
13. Domains for 1lrq:
  1. Domain d1lrqa_: 1lrq A: [78163]
  2. Domain d1lrqb_: 1lrq B: [78164]
14. Domains for 1pck:
  1. Domain d1pcka_: 1pck A: [94438]
  2. Domain d1pckb_: 1pck B: [94439]
15. Domains for 1pcw:
  1. Domain d1pcwa_: 1pcw A: [94495]
  2. Domain d1pcwb_: 1pcw B: [94496]
16. Domains for 1pe1:
  1. Domain d1pe1a_: 1pe1 A: [94591]
  2. Domain d1pe1b_: 1pe1 B: [94592]
Escherichia coli [TaxId:562] [51603] (7 PDB entries)
1. Domains for 1d9e:
  1. Domain d1d9ea_: 1d9e A: [29195]
  2. Domain d1d9eb_: 1d9e B: [29196]
  3. Domain d1d9ec_: 1d9e C: [29197]
  4. Domain d1d9ed_: 1d9e D: [29198]
2. Domain for 1g7u:
  - Domain d1g7ua_: 1g7u A: [60334]
3. Domain for 1g7v:
  - Domain d1g7va_: 1g7v A: [60335]
4. Domain for 1gg0:
  - Domain d1gg0a_: 1gg0 A: [29199]
5. Domain for 1phq:
  - Domain d1phqa_: 1phq A: [104154]
6. Domain for 1phw:
  - Domain d1phwa_: 1phw A: [104155]
7. Domain for 1pl9:
  - Domain d1pl9a_: 1pl9 A: [104188]
Haemophilus influenzae [TaxId:727] [102095] (1 PDB entry)
- Domains for 1o60:
  1. Domain d1o60a_: 1o60 A: [92532]
  2. Domain d1o60b_: 1o60 B: [92533]
  3. Domain d1o60c_: 1o60 C: [92534]
  4. Domain d1o60d_: 1o60 D: [92535]
    structural genomics

More info for Protein 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) from c.1.10.4: Class I DAHP synthetase

Timeline for Protein 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) from c.1.10.4: Class I DAHP synthetase:

Protein 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) from c.1.10.4: Class I DAHP synthetase first appeared (with stable ids) in SCOP 1.55
Protein 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) from c.1.10.4: Class I DAHP synthetase appears in SCOP 1.67
Protein 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) from c.1.10.4: Class I DAHP synthetase appears in SCOP 1.71
Protein 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) from c.1.10.4: Class I DAHP synthetase appears in the current release, SCOPe 2.08