SCOP 1.67: Species: Pig (Sus scrofa)

Lineage for Species: Pig (Sus scrofa)

Root: SCOP 1.67
Class c: Alpha and beta proteins (a/b) [51349] (130 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (28 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.8: (Trans)glycosidases [51445] (10 families)

Family c.1.8.1: Amylase, catalytic domain [51446] (24 proteins)
members of the family may contain various insert subdomains
in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain

Protein Animal alpha-amylase [51458] (3 species)
contains Ca2+-binding subdomain, residues 100-170
Species Pig (Sus scrofa) [TaxId:9823] [51459] (12 PDB entries)

PDB entries in Species: Pig (Sus scrofa):

Domain(s) for 1bvn:
- Domain d1bvnp2: 1bvn P:1-403 [28754]
  Other proteins in same PDB: d1bvnp1, d1bvnt_
  complexed with ca, cl
Domain(s) for 1dhk:
- Domain d1dhka2: 1dhk A:1-403 [28748]
  Other proteins in same PDB: d1dhka1, d1dhkb_
  complexed with ca, cl, nag
Domain(s) for 1hx0:
- Domain d1hx0a2: 1hx0 A:1-403 [61347]
  Other proteins in same PDB: d1hx0a1
  complexed with ac1, ca, cl, egl, glb, glc, mal
Domain(s) for 1jfh:
- Domain d1jfh_2: 1jfh 1-403 [28749]
  Other proteins in same PDB: d1jfh_1
  complexed with ca, cl, hg, ma1, ma2, ma3, man
Domain(s) for 1kxq:
1. Domain d1kxqa2: 1kxq A:1-403 [73164]
  Other proteins in same PDB: d1kxqa1, d1kxqb1, d1kxqc1, d1kxqd1, d1kxqe_, d1kxqf_, d1kxqg_, d1kxqh_
2. Domain d1kxqb2: 1kxq B:1-403 [73166]
  Other proteins in same PDB: d1kxqa1, d1kxqb1, d1kxqc1, d1kxqd1, d1kxqe_, d1kxqf_, d1kxqg_, d1kxqh_
3. Domain d1kxqc2: 1kxq C:1-403 [73168]
  Other proteins in same PDB: d1kxqa1, d1kxqb1, d1kxqc1, d1kxqd1, d1kxqe_, d1kxqf_, d1kxqg_, d1kxqh_
4. Domain d1kxqd2: 1kxq D:1-403 [73170]
  Other proteins in same PDB: d1kxqa1, d1kxqb1, d1kxqc1, d1kxqd1, d1kxqe_, d1kxqf_, d1kxqg_, d1kxqh_
  complexed with ca, cl
Domain(s) for 1kxt:
1. Domain d1kxta2: 1kxt A:1-403 [73178]
  Other proteins in same PDB: d1kxta1, d1kxtb_, d1kxtc1, d1kxtd_, d1kxte1, d1kxtf_
2. Domain d1kxtc2: 1kxt C:1-403 [73181]
  Other proteins in same PDB: d1kxta1, d1kxtb_, d1kxtc1, d1kxtd_, d1kxte1, d1kxtf_
3. Domain d1kxte2: 1kxt E:1-403 [73184]
  Other proteins in same PDB: d1kxta1, d1kxtb_, d1kxtc1, d1kxtd_, d1kxte1, d1kxtf_
  complexed with ca, cl
Domain(s) for 1kxv:
1. Domain d1kxva2: 1kxv A:1-403 [73187]
  Other proteins in same PDB: d1kxva1, d1kxvb1, d1kxvc_, d1kxvd_
2. Domain d1kxvb2: 1kxv B:1-403 [73189]
  Other proteins in same PDB: d1kxva1, d1kxvb1, d1kxvc_, d1kxvd_
Domain(s) for 1ose:
- Domain d1ose_2: 1ose 1-403 [28753]
  Other proteins in same PDB: d1ose_1
  complexed with acr, ca, cl, glc
Domain(s) for 1pif:
- Domain d1pif_2: 1pif 1-403 [28752]
  Other proteins in same PDB: d1pif_1
  complexed with ca, cl
Domain(s) for 1pig:
- Domain d1pig_2: 1pig 1-403 [28751]
  Other proteins in same PDB: d1pig_1
  complexed with agl, ca, cl, glc, hmc
Domain(s) for 1ppi:
- Domain d1ppi_2: 1ppi 1-403 [28750]
  Other proteins in same PDB: d1ppi_1
  complexed with ca, cl, daf, glc
Domain(s) for 1ua3:
- Domain d1ua3a2: 1ua3 A:1-403 [99127]
  Other proteins in same PDB: d1ua3a1
  complexed with ca, cl, egl, glc, mal, mlr

More info for Species Pig (Sus scrofa) [TaxId:9823] from c.1.8.1 Animal alpha-amylase

Timeline for Species Pig (Sus scrofa) [TaxId:9823] from c.1.8.1 Animal alpha-amylase:

Species Pig (Sus scrofa) [TaxId:9823] from c.1.8.1 Animal alpha-amylase first appeared (with stable ids) in SCOP 1.55
Species Pig (Sus scrofa) [TaxId:9823] from c.1.8.1 Animal alpha-amylase appears in SCOP 1.65
Species Pig (Sus scrofa) [TaxId:9823] from c.1.8.1 Animal alpha-amylase appears in SCOP 1.69
Species Pig (Sus scrofa) [TaxId:9823] from c.1.8.1 Animal alpha-amylase appears in the current release, SCOPe 2.08