Lineage for Protein: Animal alpha-amylase

  1. Root: SCOP 1.63
  2. 235644Class c: Alpha and beta proteins (a/b) [51349] (117 folds)
  3. 235645Fold c.1: TIM beta/alpha-barrel [51350] (26 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 236226Superfamily c.1.8: (Trans)glycosidases [51445] (9 families) (S)
  5. 236227Family c.1.8.1: Amylase, catalytic domain [51446] (21 proteins)
    members of the family may contain various insert subdomains
    in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain
  6. 236262Protein Animal alpha-amylase [51458] (3 species)
    contains Ca2+-binding subdomain, residues 100-170

Species:

  1. 236263Human (Homo sapiens) [TaxId:9606] [51460] (18 PDB entries)
    1. Domain for 1b2y:
    2. Domain for 1bsi:
    3. Domain for 1c8q:
    4. Domain for 1cpu:
    5. Domain for 1hny:
    6. Domain for 1jxj:
    7. Domain for 1jxk:
    8. Domain for 1kb3:
    9. Domain for 1kbb:
    10. Domain for 1kbk:
    11. Domain for 1kgu:
    12. Domain for 1kgw:
    13. Domain for 1kgx:
    14. Domain for 1mfu:
    15. Domain for 1mfv:
    16. Domain for 1smd:
    17. Domain for 2cpu:
    18. Domain for 3cpu:
  2. 236282Pig (Sus scrofa) [TaxId:9823] [51459] (11 PDB entries)
    1. Domain for 1bvn:
    2. Domain for 1dhk:
    3. Domain for 1hx0:
    4. Domain for 1jfh:
    5. Domains for 1kxq:
      1. 236284Domain d1kxqa2: 1kxq A:1-403 [73164]
        Other proteins in same PDB: d1kxqa1, d1kxqb1, d1kxqc1, d1kxqd1, d1kxqe_, d1kxqf_, d1kxqg_, d1kxqh_
      2. 236285Domain d1kxqb2: 1kxq B:1-403 [73166]
        Other proteins in same PDB: d1kxqa1, d1kxqb1, d1kxqc1, d1kxqd1, d1kxqe_, d1kxqf_, d1kxqg_, d1kxqh_
      3. 236286Domain d1kxqc2: 1kxq C:1-403 [73168]
        Other proteins in same PDB: d1kxqa1, d1kxqb1, d1kxqc1, d1kxqd1, d1kxqe_, d1kxqf_, d1kxqg_, d1kxqh_
      4. 236287Domain d1kxqd2: 1kxq D:1-403 [73170]
        Other proteins in same PDB: d1kxqa1, d1kxqb1, d1kxqc1, d1kxqd1, d1kxqe_, d1kxqf_, d1kxqg_, d1kxqh_
        complexed with ca, cl
    6. Domains for 1kxt:
      1. 236293Domain d1kxta2: 1kxt A:1-403 [73178]
        Other proteins in same PDB: d1kxta1, d1kxtb_, d1kxtc1, d1kxtd_, d1kxte1, d1kxtf_
      2. 236294Domain d1kxtc2: 1kxt C:1-403 [73181]
        Other proteins in same PDB: d1kxta1, d1kxtb_, d1kxtc1, d1kxtd_, d1kxte1, d1kxtf_
      3. 236295Domain d1kxte2: 1kxt E:1-403 [73184]
        Other proteins in same PDB: d1kxta1, d1kxtb_, d1kxtc1, d1kxtd_, d1kxte1, d1kxtf_
        complexed with ca, cl
    7. Domains for 1kxv:
      1. 236288Domain d1kxva2: 1kxv A:1-403 [73187]
        Other proteins in same PDB: d1kxva1, d1kxvb1, d1kxvc_, d1kxvd_
      2. 236289Domain d1kxvb2: 1kxv B:1-403 [73189]
        Other proteins in same PDB: d1kxva1, d1kxvb1, d1kxvc_, d1kxvd_
    8. Domain for 1ose:
    9. Domain for 1pif:
    10. Domain for 1pig:
    11. Domain for 1ppi:
  3. 236300Yellow mealworm (Tenebrio molitor), larva [TaxId:7067] [51461] (4 PDB entries)
    1. Domain for 1clv:
    2. Domain for 1jae:
    3. Domain for 1tmq:
    4. Domain for 1viw:

More info for Protein Animal alpha-amylase from c.1.8.1: Amylase, catalytic domain

Timeline for Protein Animal alpha-amylase from c.1.8.1: Amylase, catalytic domain: