SCOP 1.59: Family c.1.8.1: alpha-Amylases, N-terminal domain

Lineage for Family c.1.8.1: alpha-Amylases, N-terminal domain

1. Root: SCOP 1.59

2. Class c: Alpha and beta proteins (a/b) [51349] (113 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (24 superfamilies)

4. Superfamily c.1.8: (Trans)glycosidases [51445] (9 families)

5. Family c.1.8.1: alpha-Amylases, N-terminal domain [51446] (13 proteins)

Proteins:

1. Amylomaltase MalQ [51478] (1 species)

   • Species Thermus aquaticus [TaxId:271] [51479] (2 PDB entries)

2. Amylosucrase [69384] (1 species)

   • Species Neisseria polysaccharea [TaxId:489] [69385] (3 PDB entries)

3. Animal alpha-amylase [51458] (3 species)

   1. Species Human (Homo sapiens) [TaxId:9606] [51460] (13 PDB entries)

   2. Species Pig (Sus scrofa) [TaxId:9823] [51459] (8 PDB entries)

   3. Species Yellow mealworm (Tenebrio molitor), larva [TaxId:7067] [51461] (4 PDB entries)

4. Bacterial alpha-amylase [51447] (5 species)

   1. Species Bacillus amyloliquefaciens/Bacillus licheniformis chimera [63903] (4 PDB entries)

   2. Species Bacillus licheniformis [TaxId:1402] [51448] (3 PDB entries)

   3. Species Bacillus stearothermophilus [TaxId:1422] [51451] (1 PDB entry)

   4. Species Bacillus subtilis [TaxId:1423] [51450] (1 PDB entry)

   5. Species Pseudoalteromonas haloplanctis (Alteromonas haloplanctis) [51449] (4 PDB entries)

5. Cyclodextrin glycosyltransferase [51452] (5 species)

   1. Species Alkalophilic bacillus sp., strain 1011 [51456] (4 PDB entries)

   2. Species Bacillus circulans, different strains [TaxId:1397] [51453] (29 PDB entries)

   3. Species Bacillus stearothermophilus [TaxId:1422] [51454] (1 PDB entry)

   4. Species Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId:1422] [51455] (2 PDB entries)

   5. Species Thermoanaerobacterium thermosulfurigenes, EM1 [TaxId:33950] [51457] (2 PDB entries)

6. Fungal alpha-amylases [51462] (2 species)

   1. Species Aspergillus niger, acid amylase [TaxId:5061] [51463] (1 PDB entry)

   2. Species Aspergillus oryzae, Taka-amylase [TaxId:5062] [51464] (3 PDB entries)

7. G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) [51472] (1 species)

   • Species Pseudomonas stutzeri [TaxId:316] [51473] (9 PDB entries)

8. Glycosyltrehalose trehalohydrolase, central domain [51468] (1 species)

   • Species Archaeon Sulfolobus solfataricus, km1 [TaxId:2287] [51469] (2 PDB entries)

9. Isoamylase, central domain [51470] (1 species)

   • Species Pseudomonas amyloderamosa [TaxId:32043] [51471] (1 PDB entry)

10. Maltogenic amylase, central domain [51465] (2 species)

    1. Species Thermoactinomyces vulgaris, TVAII [TaxId:2026] [51467] (4 PDB entries)

    2. Species Thermus sp. [TaxId:275] [51466] (1 PDB entry)

11. Maltosyltransferase [63904] (1 species)

    • Species Thermotoga maritima [TaxId:243274] [63905] (2 PDB entries)

12. Oligo-1,6, glucosidase [51476] (1 species)

    • Species Bacillus cereus [TaxId:1396] [51477] (1 PDB entry)

13. Plant alpha-amylase [51474] (1 species)

    • Species Barley (Hordeum vulgare), seeds, AMY2 isozyme [TaxId:4513] [51475] (3 PDB entries)

More info for Family c.1.8.1: alpha-Amylases, N-terminal domain

Timeline for Family c.1.8.1: alpha-Amylases, N-terminal domain:

• Family c.1.8.1: alpha-Amylases, N-terminal domain first appeared (with stable ids) in SCOP 1.55
  
• Family c.1.8.1: alpha-Amylases, N-terminal domain appears in SCOP 1.57
  
• Family c.1.8.1: alpha-Amylases, N-terminal domain appears in SCOP 1.61
  
• Family c.1.8.1: alpha-Amylases, N-terminal domain appears in the current release, SCOPe 2.08, called Family c.1.8.1: Amylase, catalytic domain