Lineage for Protein: Eukaryotic ornithine decarboxylase

  1. Root: SCOP 1.75
  2. 814173Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 814174Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 815023Superfamily c.1.6: PLP-binding barrel [51419] (2 families) (S)
    circular permutation of the canonical fold: begins with an alpha helix and ends with a beta-strand
  5. 815024Family c.1.6.1: Alanine racemase-like, N-terminal domain [51420] (3 proteins)
  6. 815067Protein Eukaryotic ornithine decarboxylase [51423] (3 species)

Species:

  1. 815068Human (Homo sapiens) [TaxId:9606] [51424] (1 PDB entry)
  2. 815071Mouse (Mus musculus) [TaxId:10090] [51425] (1 PDB entry)
  3. 815073Trypanosoma brucei [TaxId:5691] [51426] (5 PDB entries)
    Uniprot P07805
    1. Domains for 1f3t:
      1. 815074Domain d1f3ta2: 1f3t A:44-283 [28655]
        Other proteins in same PDB: d1f3ta1, d1f3tb1, d1f3tc1, d1f3td1
      2. 815075Domain d1f3tb2: 1f3t B:44-283 [28656]
        Other proteins in same PDB: d1f3ta1, d1f3tb1, d1f3tc1, d1f3td1
      3. 815076Domain d1f3tc2: 1f3t C:44-283 [28657]
        Other proteins in same PDB: d1f3ta1, d1f3tb1, d1f3tc1, d1f3td1
      4. 815077Domain d1f3td2: 1f3t D:44-283 [28658]
        Other proteins in same PDB: d1f3ta1, d1f3tb1, d1f3tc1, d1f3td1
        complexed with plp, put
    2. Domains for 1njj:
      1. 815086Domain d1njja2: 1njj A:44-283 [91906]
        Other proteins in same PDB: d1njja1, d1njjb1, d1njjc1, d1njjd1
      2. 815087Domain d1njjb2: 1njj B:44-283 [91908]
        Other proteins in same PDB: d1njja1, d1njjb1, d1njjc1, d1njjd1
      3. 815088Domain d1njjc2: 1njj C:44-283 [91910]
        Other proteins in same PDB: d1njja1, d1njjb1, d1njjc1, d1njjd1
      4. 815089Domain d1njjd2: 1njj D:44-283 [91912]
        Other proteins in same PDB: d1njja1, d1njjb1, d1njjc1, d1njjd1
        complexed with get, orx
    3. Domains for 1qu4:
      1. 815090Domain d1qu4a2: 1qu4 A:44-283 [28659]
        Other proteins in same PDB: d1qu4a1, d1qu4b1, d1qu4c1, d1qu4d1
      2. 815091Domain d1qu4b2: 1qu4 B:44-283 [28660]
        Other proteins in same PDB: d1qu4a1, d1qu4b1, d1qu4c1, d1qu4d1
      3. 815092Domain d1qu4c2: 1qu4 C:44-283 [28661]
        Other proteins in same PDB: d1qu4a1, d1qu4b1, d1qu4c1, d1qu4d1
      4. 815093Domain d1qu4d2: 1qu4 D:44-283 [28662]
        Other proteins in same PDB: d1qu4a1, d1qu4b1, d1qu4c1, d1qu4d1
    4. Domains for 1szr:
      1. 815082Domain d1szra2: 1szr A:44-283 [112175]
        Other proteins in same PDB: d1szra1, d1szrb1, d1szrc1, d1szrd1
      2. 815083Domain d1szrb2: 1szr B:44-283 [112177]
        Other proteins in same PDB: d1szra1, d1szrb1, d1szrc1, d1szrd1
      3. 815084Domain d1szrc2: 1szr C:44-283 [112179]
        Other proteins in same PDB: d1szra1, d1szrb1, d1szrc1, d1szrd1
      4. 815085Domain d1szrd2: 1szr D:44-283 [112181]
        Other proteins in same PDB: d1szra1, d1szrb1, d1szrc1, d1szrd1
        complexed with orx, plg, pxp; mutant
    5. Domains for 2tod:
      1. 815078Domain d2toda2: 2tod A:44-283 [28651]
        Other proteins in same PDB: d2toda1, d2todb1, d2todc1, d2todd1
      2. 815079Domain d2todb2: 2tod B:44-283 [28652]
        Other proteins in same PDB: d2toda1, d2todb1, d2todc1, d2todd1
      3. 815080Domain d2todc2: 2tod C:44-283 [28653]
        Other proteins in same PDB: d2toda1, d2todb1, d2todc1, d2todd1
      4. 815081Domain d2todd2: 2tod D:44-283 [28654]
        Other proteins in same PDB: d2toda1, d2todb1, d2todc1, d2todd1

More info for Protein Eukaryotic ornithine decarboxylase from c.1.6.1: Alanine racemase-like, N-terminal domain

Timeline for Protein Eukaryotic ornithine decarboxylase from c.1.6.1: Alanine racemase-like, N-terminal domain: