Lineage for Species: Jack bean (Canavalia ensiformis), canavalin/vinculin [TaxId: 3823]

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2403751Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
    one turn of helix is made by two pairs of antiparallel strands linked with short turns
    has appearance of a sandwich of distinct architecture and jelly-roll topology
  4. 2403752Superfamily b.82.1: RmlC-like cupins [51182] (25 families) (S)
  5. 2403830Family b.82.1.2: Germin/Seed storage 7S protein [51187] (5 proteins)
  6. 2403854Protein Seed storage 7S protein [51188] (6 species)
    duplication: consists of two germin-like domains spatially arranged as subunits in the RmlC dimer; trimer is similar to the germin hexamer
  7. 2403864Species Jack bean (Canavalia ensiformis), canavalin/vinculin [TaxId:3823] [51190] (11 PDB entries)

PDB entries in Species: Jack bean (Canavalia ensiformis), canavalin/vinculin [TaxId: 3823]:

  1. Domain(s) for 1cau:
    1. 2403877Domain d1caua_: 1cau A: [28102]
    2. 2403878Domain d1caub_: 1cau B: [28103]
  2. Domain(s) for 1cav:
    1. 2403885Domain d1cava_: 1cav A: [28110]
    2. 2403886Domain d1cavb_: 1cav B: [28111]
  3. Domain(s) for 1caw:
    1. 2403887Domain d1cawa_: 1caw A: [28112]
    2. 2403888Domain d1cawb_: 1caw B: [28113]
  4. Domain(s) for 1cax:
    1. 2403879Domain d1caxa_: 1cax A: [28104]
    2. 2403880Domain d1caxb_: 1cax B: [28105]
    3. 2403881Domain d1caxc_: 1cax C: [28106]
    4. 2403882Domain d1caxd_: 1cax D: [28107]
    5. 2403883Domain d1caxe_: 1cax E: [28108]
    6. 2403884Domain d1caxf_: 1cax F: [28109]
  5. Domain(s) for 1dgr:
    1. 2403869Domain d1dgr.1: 1dgr X:,Y: [28097]
      complexed with po4
    2. 2403870Domain d1dgr.2: 1dgr V:,W: [28099]
      complexed with po4
    3. 2403871Domain d1dgr.4: 1dgr N:,M: [144355]
      complexed with po4
    4. 2403872Domain d1dgra_: 1dgr A: [28096]
      complexed with po4
    5. 2403873Domain d1dgrb_: 1dgr B: [28098]
      complexed with po4
    6. 2403874Domain d1dgrc_: 1dgr C: [28100]
      complexed with po4
  6. Domain(s) for 1dgw:
    1. 2403865Domain d1dgw.1: 1dgw X:,Y: [28091]
      complexed with po4
    2. 2403866Domain d1dgwa_: 1dgw A: [28090]
      complexed with po4
  7. Domain(s) for 2cau:
    1. 2403867Domain d2caua1: 2cau A:46-223 [28092]
    2. 2403868Domain d2caua2: 2cau A:246-421 [28093]
  8. Domain(s) for 2cav:
    1. 2403875Domain d2cava1: 2cav A:46-225 [28094]
    2. 2403876Domain d2cava2: 2cav A:246-422 [28095]
  9. Domain(s) for 6v7g:
    1. 3081135Domain d6v7ga1: 6v7g A:46-225 [381197]
      automated match to d2cava1
      complexed with act, bez, cit
    2. 3081136Domain d6v7ga2: 6v7g A:241-424 [381198]
      automated match to d2cava2
      complexed with act, bez, cit
  10. Domain(s) for 6v7j:
    1. 3081143Domain d6v7ja1: 6v7j A:46-223 [381205]
      automated match to d2cava1
      complexed with bez, ca, gol
    2. 3081144Domain d6v7ja2: 6v7j A:245-424 [381206]
      automated match to d2cava2
      complexed with bez, ca, gol
    3. 3081189Domain d6v7jb1: 6v7j B:46-225 [381251]
      automated match to d2cava1
      complexed with bez, ca, gol
    4. 3081190Domain d6v7jb2: 6v7j B:246-424 [381252]
      automated match to d2cava2
      complexed with bez, ca, gol
    5. 3081200Domain d6v7jc1: 6v7j C:46-227 [381262]
      automated match to d2cava1
      complexed with bez, ca, gol
    6. 3081201Domain d6v7jc2: 6v7j C:246-424 [381263]
      automated match to d2cava2
      complexed with bez, ca, gol
  11. Domain(s) for 6v7l:
    1. 3081129Domain d6v7lb1: 6v7l B:46-226 [381191]
      automated match to d2cava1
      complexed with bez
    2. 3081130Domain d6v7lb2: 6v7l B:246-424 [381192]
      automated match to d2cava2
      complexed with bez
    3. 3081131Domain d6v7la1: 6v7l A:46-223 [381193]
      automated match to d2cava1
      complexed with bez
    4. 3081132Domain d6v7la2: 6v7l A:246-424 [381194]
      automated match to d2cava2
      complexed with bez
    5. 3081137Domain d6v7lc1: 6v7l C:46-225 [381199]
      automated match to d2cava1
      complexed with bez
    6. 3081138Domain d6v7lc2: 6v7l C:246-424 [381200]
      automated match to d2cava2
      complexed with bez

More info for Species Jack bean (Canavalia ensiformis), canavalin/vinculin [TaxId:3823] from b.82.1.2 Seed storage 7S protein

Timeline for Species Jack bean (Canavalia ensiformis), canavalin/vinculin [TaxId:3823] from b.82.1.2 Seed storage 7S protein: