Lineage for Protein: Seed storage 7S protein

  1. Root: SCOP 1.67
  2. 362614Class b: All beta proteins [48724] (141 folds)
  3. 381159Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
    one turn of helix is made by two pairs of antiparallel strands linked with short turns
    has appearance of a sandwich of distinct architecture and jelly-roll topology
  4. 381160Superfamily b.82.1: RmlC-like cupins [51182] (12 families) (S)
  5. 381190Family b.82.1.2: Germin/Seed storage 7S protein [51187] (4 proteins)
  6. 381209Protein Seed storage 7S protein [51188] (5 species)
    duplication: consists of two germin-like domains spatially arranged as subunits in the RmlC dimer; trimer is similar to the germin hexamer

Species:

  1. 381210French bean (Phaseolus vulgaris), phaseolin [TaxId:3885] [51189] (2 PDB entries)
    1. Domains for 1phs:
      1. 381217Domain d1phs_1: 1phs 11-212 [28088]
      2. 381218Domain d1phs_2: 1phs 220-381 [28089]
        CA-atoms only
    2. Domains for 2phl:
      1. 381211Domain d2phla1: 2phl A:11-210 [28082]
      2. 381212Domain d2phla2: 2phl A:220-381 [28083]
      3. 381213Domain d2phlb1: 2phl B:11-210 [28084]
      4. 381214Domain d2phlb2: 2phl B:220-381 [28085]
      5. 381215Domain d2phlc1: 2phl C:10-210 [28086]
      6. 381216Domain d2phlc2: 2phl C:220-381 [28087]
        complexed with nag, po4
  2. 381219Jack bean (Canavalia ensiformis), canavalin/vinculin [TaxId:3823] [51190] (8 PDB entries)
    1. Domains for 1cau:
      1. 381226Domain d1caua_: 1cau A: [28102]
      2. 381227Domain d1caub_: 1cau B: [28103]
    2. Domains for 1cav:
      1. 381234Domain d1cava_: 1cav A: [28110]
      2. 381235Domain d1cavb_: 1cav B: [28111]
    3. Domains for 1caw:
      1. 381242Domain d1cawa_: 1caw A: [28112]
      2. 381243Domain d1cawb_: 1caw B: [28113]
    4. Domains for 1cax:
      1. 381228Domain d1caxa_: 1cax A: [28104]
      2. 381229Domain d1caxb_: 1cax B: [28105]
      3. 381230Domain d1caxc_: 1cax C: [28106]
      4. 381231Domain d1caxd_: 1cax D: [28107]
      5. 381232Domain d1caxe_: 1cax E: [28108]
      6. 381233Domain d1caxf_: 1cax F: [28109]
    5. Domains for 1dgr:
      1. 381236Domain d1dgr.1: 1dgr X:,Y: [28097]
      2. 381237Domain d1dgr.2: 1dgr V:,W: [28099]
      3. 381238Domain d1dgr.3: 1dgr M:,N: [28101]
      4. 381239Domain d1dgra_: 1dgr A: [28096]
      5. 381240Domain d1dgrb_: 1dgr B: [28098]
      6. 381241Domain d1dgrc_: 1dgr C: [28100]
    6. Domains for 1dgw:
      1. 381220Domain d1dgw.1: 1dgw X:,Y: [28091]
      2. 381221Domain d1dgwa_: 1dgw A: [28090]
    7. Domains for 2cau:
      1. 381222Domain d2caua1: 2cau A:46-223 [28092]
      2. 381223Domain d2caua2: 2cau A:246-421 [28093]
    8. Domains for 2cav:
      1. 381224Domain d2cava1: 2cav A:46-225 [28094]
      2. 381225Domain d2cava2: 2cav A:246-422 [28095]
  3. 381244Soybean (Glycine max), beta-conglycinin [75032] (2 PDB entries)
    1. Domains for 1ipj:
      1. 381245Domain d1ipja1: 1ipj A:9-176 [71258]
      2. 381246Domain d1ipja2: 1ipj A:183-393 [71259]
      3. 381247Domain d1ipjb1: 1ipj B:9-175 [71260]
      4. 381248Domain d1ipjb2: 1ipj B:186-393 [71261]
      5. 381249Domain d1ipjc1: 1ipj C:9-177 [71262]
      6. 381250Domain d1ipjc2: 1ipj C:181-393 [71263]
        complexed with nag
    2. Domains for 1ipk:
      1. 381251Domain d1ipka1: 1ipk A:8-174 [71264]
      2. 381252Domain d1ipka2: 1ipk A:183-392 [71265]
      3. 381253Domain d1ipkb1: 1ipk B:9-174 [71266]
      4. 381254Domain d1ipkb2: 1ipk B:183-392 [71267]
      5. 381255Domain d1ipkc1: 1ipk C:3-180 [71268]
      6. 381256Domain d1ipkc2: 1ipk C:181-392 [71269]
  4. 381257Soybean (Glycine max), glycinin A3B4 [TaxId:3847] [89412] (1 PDB entry)
  5. 381262Soybean (Glycine max), proglycinin [TaxId:3847] [69345] (3 PDB entries)
    1. Domains for 1fxz:
      1. 381263Domain d1fxza1: 1fxz A:10-248 [65059]
      2. 381264Domain d1fxza2: 1fxz A:297-470 [65060]
      3. 381265Domain d1fxzb1: 1fxz B:10-248 [65061]
      4. 381266Domain d1fxzb2: 1fxz B:297-470 [65062]
      5. 381267Domain d1fxzc1: 1fxz C:10-248 [65063]
      6. 381268Domain d1fxzc2: 1fxz C:297-470 [65064]
    2. Domains for 1ucx:
      1. 381269Domain d1ucxa1: 1ucx A:14-248 [99192]
      2. 381270Domain d1ucxa2: 1ucx A:297-470 [99193]
      3. 381271Domain d1ucxb1: 1ucx B:14-248 [99194]
      4. 381272Domain d1ucxb2: 1ucx B:297-470 [99195]
      5. 381273Domain d1ucxc1: 1ucx C:14-248 [99196]
      6. 381274Domain d1ucxc2: 1ucx C:297-470 [99197]
        mutant
    3. Domains for 1ud1:
      1. 381275Domain d1ud1a1: 1ud1 A:10-248 [99202]
      2. 381276Domain d1ud1a2: 1ud1 A:297-470 [99203]
      3. 381277Domain d1ud1b1: 1ud1 B:10-248 [99204]
      4. 381278Domain d1ud1b2: 1ud1 B:297-470 [99205]
      5. 381279Domain d1ud1c1: 1ud1 C:10-248 [99206]
      6. 381280Domain d1ud1c2: 1ud1 C:297-470 [99207]
        mutant

More info for Protein Seed storage 7S protein from b.82.1.2: Germin/Seed storage 7S protein

Timeline for Protein Seed storage 7S protein from b.82.1.2: Germin/Seed storage 7S protein: