SCOP 1.65: Family b.82.1.2: Germine/Seed storage 7S protein

Lineage for Family b.82.1.2: Germine/Seed storage 7S protein

1. Root: SCOP 1.65

2. Class b: All beta proteins [48724] (126 folds)

3. Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
   one turn of helix is made by two pairs of antiparallel strands linked with short turns
   has appearance of a sandwich of distinct architecture and jelly-roll topology

4. Superfamily b.82.1: RmlC-like cupins [51182] (9 families)

5. Family b.82.1.2: Germine/Seed storage 7S protein [51187] (4 proteins)

Proteins:

1. Auxin binding protein [75030] (1 species)

   • Species Maize (Zea mays) [TaxId:4577] [75031] (2 PDB entries)

2. Germine [63853] (1 species)
   Metal (manganese)-binding protein with oxalate oxidase and superoxide dismutase activities; homohexamer

   • Species Barley (Hordeum vulgare) [TaxId:4513] [63854] (1 PDB entry)

3. Oxalate decarboxylase YvrK [75033] (1 species)
   duplication: consists of two germine-like metal-ion binding domains

   • Species Bacillus subtilis [TaxId:1423] [75034] (2 PDB entries)

4. Seed storage 7S protein [51188] (5 species)
   duplication: consists of two germine-like domains spatially arranged as subunits in the RmlC dimer; trimer is similar to the germine hexamer

   1. Species French bean (Phaseolus vulgaris), phaseolin [TaxId:3885] [51189] (2 PDB entries)

   2. Species Jack bean (Canavalia ensiformis), canavalin/vinculin [TaxId:3823] [51190] (8 PDB entries)

   3. Species Soybean (Glycine max), beta-conglycinin [75032] (2 PDB entries)

   4. Species Soybean (Glycine max), glycinin A3B4 [TaxId:3847] [89412] (1 PDB entry)

   5. Species Soybean (Glycine max), proglycinin [TaxId:3847] [69345] (1 PDB entry)

More info for Family b.82.1.2: Germine/Seed storage 7S protein

Timeline for Family b.82.1.2: Germine/Seed storage 7S protein:

• Family b.82.1.2: Germine/Seed storage 7S protein first appeared (with stable ids) in SCOP 1.55, called Family b.82.1.2: Germin/Seed storage 7S protein
  
• Family b.82.1.2: Germine/Seed storage 7S protein was called Family b.82.1.2: Germin/Seed storage 7S protein in SCOP 1.63
  
• Family b.82.1.2: Germine/Seed storage 7S protein is called Family b.82.1.2: Germin/Seed storage 7S protein in SCOP 1.67
  
• Family b.82.1.2: Germine/Seed storage 7S protein appears in the current release, SCOPe 2.08, called Family b.82.1.2: Germin/Seed storage 7S protein