Lineage for Species: Barley (Hordeum vulgare), seeds, AMY2 isozyme [TaxId: 4513]

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2810331Fold b.71: Glycosyl hydrolase domain [51010] (1 superfamily)
    folded sheet; greek-key
  4. 2810332Superfamily b.71.1: Glycosyl hydrolase domain [51011] (6 families) (S)
    this domain is C-terminal to the catalytic beta/alpha barrel domain
  5. 2810333Family b.71.1.1: alpha-Amylases, C-terminal beta-sheet domain [51012] (22 proteins)
    this domain follows the catalytic beta/alpha barrel domain
  6. 2810735Protein Plant alpha-amylase [51040] (2 species)
    single beta-sheet; probable result of a decay of the common-fold
  7. 2810746Species Barley (Hordeum vulgare), seeds, AMY2 isozyme [TaxId:4513] [51041] (3 PDB entries)

PDB entries in Species: Barley (Hordeum vulgare), seeds, AMY2 isozyme [TaxId: 4513]:

  1. Domain(s) for 1amy:
    • 2810749Domain d1amya1: 1amy A:347-403 [27799]
      Other proteins in same PDB: d1amya2
      complexed with ca
      heterogeneous fold; applies to domains that adopt a different fold than the exemplar domain but has similar sequence and number of secondary structures
  2. Domain(s) for 1ava:
    1. 2810747Domain d1avaa1: 1ava A:347-403 [27797]
      Other proteins in same PDB: d1avaa2, d1avab2, d1avac_, d1avad_
      complexed with ca
      heterogeneous fold; applies to domains that adopt a different fold than the exemplar domain but has similar sequence and number of secondary structures
    2. 2810748Domain d1avab1: 1ava B:347-403 [27798]
      Other proteins in same PDB: d1avaa2, d1avab2, d1avac_, d1avad_
      complexed with ca
      heterogeneous fold; applies to domains that adopt a different fold than the exemplar domain but has similar sequence and number of secondary structures
  3. Domain(s) for 1bg9:
    • 2810750Domain d1bg9a1: 1bg9 A:347-403 [27800]
      Other proteins in same PDB: d1bg9a2
      complexed with af1, ca
      heterogeneous fold; applies to domains that adopt a different fold than the exemplar domain but has similar sequence and number of secondary structures

More info for Species Barley (Hordeum vulgare), seeds, AMY2 isozyme [TaxId:4513] from b.71.1.1 Plant alpha-amylase

Timeline for Species Barley (Hordeum vulgare), seeds, AMY2 isozyme [TaxId:4513] from b.71.1.1 Plant alpha-amylase: