SCOPe 2.07: Protein: Cyclodextrin glycosyltransferase

Lineage for Protein: Cyclodextrin glycosyltransferase

Root: SCOPe 2.07
Class b: All beta proteins [48724] (178 folds)
Fold b.71: Glycosyl hydrolase domain [51010] (1 superfamily)
folded sheet; greek-key
Superfamily b.71.1: Glycosyl hydrolase domain [51011] (6 families)
this domain is C-terminal to the catalytic beta/alpha barrel domain
Family b.71.1.1: alpha-Amylases, C-terminal beta-sheet domain [51012] (22 proteins)
this domain follows the catalytic beta/alpha barrel domain
Protein Cyclodextrin glycosyltransferase [51018] (5 species)
contains two more all-beta domains in C-terminal region, Immunoglobulin-like and trasthyretin-like

Species:

Bacillus circulans, different strains [TaxId:1397] [51019] (36 PDB entries)
1. Domain for 1cdg:
  - Domain d1cdga3: 1cdg A:407-495 [27723]
    Other proteins in same PDB: d1cdga1, d1cdga2, d1cdga4
    complexed with ca, mal
2. Domain for 1cgt:
  - Domain d1cgta3: 1cgt A:407-494 [27722]
    Other proteins in same PDB: d1cgta1, d1cgta2, d1cgta4
    complexed with ca
3. Domain for 1cgu:
  - Domain d1cgua3: 1cgu A:407-494 [27745]
    Other proteins in same PDB: d1cgua1, d1cgua2, d1cgua4
    complexed with ca
4. Domain for 1cgv:
  - Domain d1cgva3: 1cgv A:407-495 [27727]
    Other proteins in same PDB: d1cgva1, d1cgva2, d1cgva4
    complexed with ca, mal; mutant
5. Domain for 1cgw:
  - Domain d1cgwa3: 1cgw A:407-495 [27729]
    Other proteins in same PDB: d1cgwa1, d1cgwa2, d1cgwa4
    complexed with ca, mal; mutant
6. Domain for 1cgx:
  - Domain d1cgxa3: 1cgx A:407-495 [27739]
    Other proteins in same PDB: d1cgxa1, d1cgxa2, d1cgxa4
    complexed with ca, mal; mutant
7. Domain for 1cgy:
  - Domain d1cgya3: 1cgy A:407-495 [27730]
    Other proteins in same PDB: d1cgya1, d1cgya2, d1cgya4
    complexed with ca, mal; mutant
8. Domain for 1cxe:
  - Domain d1cxea3: 1cxe A:407-495 [27724]
    Other proteins in same PDB: d1cxea1, d1cxea2, d1cxea4
    complexed with ca, mal
9. Domain for 1cxf:
  - Domain d1cxfa3: 1cxf A:407-495 [27748]
    Other proteins in same PDB: d1cxfa1, d1cxfa2, d1cxfa4
    complexed with acx, ca, mal; mutant
10. Domain for 1cxh:
  - Domain d1cxha3: 1cxh A:407-495 [27728]
    Other proteins in same PDB: d1cxha1, d1cxha2, d1cxha4
    complexed with ca, mal
11. Domain for 1cxi:
  - Domain d1cxia3: 1cxi A:407-495 [27725]
    Other proteins in same PDB: d1cxia1, d1cxia2, d1cxia4
    complexed with ca, mal
12. Domain for 1cxk:
  - Domain d1cxka3: 1cxk A:407-496 [27742]
    Other proteins in same PDB: d1cxka1, d1cxka2, d1cxka4
    complexed with ca, glc
13. Domain for 1cxl:
  - Domain d1cxla3: 1cxl A:407-496 [27736]
    Other proteins in same PDB: d1cxla1, d1cxla2, d1cxla4
    complexed with ca, mpd
14. Domain for 1d3c:
  - Domain d1d3ca3: 1d3c A:407-496 [27734]
    Other proteins in same PDB: d1d3ca1, d1d3ca2, d1d3ca4
    complexed with ca, mpd
15. Domain for 1dtu:
  - Domain d1dtua3: 1dtu A:407-496 [27747]
    Other proteins in same PDB: d1dtua1, d1dtua2, d1dtua4
    complexed with adh, bgc, ca, g6d, glc; mutant
16. Domain for 1eo5:
  - Domain d1eo5a3: 1eo5 A:407-496 [27735]
    Other proteins in same PDB: d1eo5a1, d1eo5a2, d1eo5a4
    complexed with ca, mpd
17. Domain for 1eo7:
  - Domain d1eo7a3: 1eo7 A:407-496 [27749]
    Other proteins in same PDB: d1eo7a1, d1eo7a2, d1eo7a4
    complexed with ca
18. Domain for 1kck:
  - Domain d1kcka3: 1kck A:407-495 [68443]
    Other proteins in same PDB: d1kcka1, d1kcka2, d1kcka4
    complexed with adh, bgc, ca, g6d, glc; mutant
19. Domain for 1kcl:
  - Domain d1kcla3: 1kcl A:407-495 [68447]
    Other proteins in same PDB: d1kcla1, d1kcla2, d1kcla4
    complexed with ca, glc, mal, mpd; mutant
20. Domain for 1ot1:
  - Domain d1ot1a3: 1ot1 A:407-495 [87394]
    Other proteins in same PDB: d1ot1a1, d1ot1a2, d1ot1a4
    complexed with acy, ca, epe, mal, mpd; mutant
21. Domain for 1ot2:
  - Domain d1ot2a3: 1ot2 A:407-495 [87398]
    Other proteins in same PDB: d1ot2a1, d1ot2a2, d1ot2a4
    complexed with acy, ca, epe, glc, mal, mpd; mutant
22. Domain for 1pez:
  - Domain d1peza3: 1pez A:407-495 [94602]
    Other proteins in same PDB: d1peza1, d1peza2, d1peza4
    complexed with acy, ca, epe, mal, mpd; mutant
23. Domain for 1pj9:
  - Domain d1pj9a3: 1pj9 A:407-495 [94756]
    Other proteins in same PDB: d1pj9a1, d1pj9a2, d1pj9a4
    complexed with acy, ca, glc, mal, mpd; mutant
24. Domains for 1tcm:
  1. Domain d1tcma3: 1tcm A:407-495 [27740]
    Other proteins in same PDB: d1tcma1, d1tcma2, d1tcma4, d1tcmb1, d1tcmb2, d1tcmb4
    complexed with ca; mutant
  2. Domain d1tcmb3: 1tcm B:407-495 [27741]
    Other proteins in same PDB: d1tcma1, d1tcma2, d1tcma4, d1tcmb1, d1tcmb2, d1tcmb4
    complexed with ca; mutant
25. Domains for 1ukq:
  1. Domain d1ukqa3: 1ukq A:407-495 [99511]
    Other proteins in same PDB: d1ukqa1, d1ukqa2, d1ukqa4, d1ukqb1, d1ukqb2, d1ukqb4
    complexed with aci, bgc, ca, g6d, glc
  2. Domain d1ukqb3: 1ukq B:407-495 [99515]
    Other proteins in same PDB: d1ukqa1, d1ukqa2, d1ukqa4, d1ukqb1, d1ukqb2, d1ukqb4
    complexed with aci, bgc, ca, g6d, glc
26. Domains for 1uks:
  1. Domain d1uksa3: 1uks A:407-495 [99519]
    Other proteins in same PDB: d1uksa1, d1uksa2, d1uksa4, d1uksb1, d1uksb2, d1uksb4
    complexed with aci, ca, gal, glc, gld; mutant
  2. Domain d1uksb3: 1uks B:407-495 [99523]
    Other proteins in same PDB: d1uksa1, d1uksa2, d1uksa4, d1uksb1, d1uksb2, d1uksb4
    complexed with aci, ca, gal, glc, gld; mutant
27. Domains for 1ukt:
  1. Domain d1ukta3: 1ukt A:407-495 [99527]
    Other proteins in same PDB: d1ukta1, d1ukta2, d1ukta4, d1uktb1, d1uktb2, d1uktb4
    complexed with aci, ca, gal, glc, gld; mutant
  2. Domain d1uktb3: 1ukt B:407-495 [99531]
    Other proteins in same PDB: d1ukta1, d1ukta2, d1ukta4, d1uktb1, d1uktb2, d1uktb4
    complexed with aci, ca, gal, glc, gld; mutant
28. Domain for 2cxg:
  - Domain d2cxga3: 2cxg A:407-495 [27746]
    Other proteins in same PDB: d2cxga1, d2cxga2, d2cxga4
    complexed with aci, ca, g6d, glc
29. Domain for 2dij:
  - Domain d2dija3: 2dij A:407-496 [27743]
    Other proteins in same PDB: d2dija1, d2dija2, d2dija4
    complexed with adh, ca, g6d, glc; mutant
30. Domain for 3cgt:
  - Domain d3cgta3: 3cgt A:407-495 [27726]
    Other proteins in same PDB: d3cgta1, d3cgta2, d3cgta4
    complexed with bcd, ca
31. Domain for 4cgt:
  - Domain d4cgta3: 4cgt A:407-495 [27732]
    Other proteins in same PDB: d4cgta1, d4cgta2, d4cgta4
    complexed with ca; mutant
32. Domain for 5cgt:
  - Domain d5cgta3: 5cgt A:407-495 [27731]
    Other proteins in same PDB: d5cgta1, d5cgta2, d5cgta4
    complexed with ca, glc; mutant
33. Domain for 6cgt:
  - Domain d6cgta3: 6cgt A:407-494 [27744]
    Other proteins in same PDB: d6cgta1, d6cgta2, d6cgta4
    complexed with ca; mutant
34. Domain for 7cgt:
  - Domain d7cgta3: 7cgt A:407-495 [27733]
    Other proteins in same PDB: d7cgta1, d7cgta2, d7cgta4
    complexed with ca; mutant
35. Domain for 8cgt:
  - Domain d8cgta3: 8cgt A:407-494 [27738]
    Other proteins in same PDB: d8cgta1, d8cgta2, d8cgta4
    complexed with ca, tm6
36. Domain for 9cgt:
  - Domain d9cgta3: 9cgt A:407-494 [27737]
    Other proteins in same PDB: d9cgta1, d9cgta2, d9cgta4
    complexed with ca, tm5
Bacillus sp., strain 1011 [TaxId:1409] [51022] (8 PDB entries)
Uniprot P05618
1. Domains for 1d7f:
  1. Domain d1d7fa3: 1d7f A:407-496 [27755]
    Other proteins in same PDB: d1d7fa1, d1d7fa2, d1d7fa4, d1d7fb1, d1d7fb2, d1d7fb4
    complexed with ca
  2. Domain d1d7fb3: 1d7f B:407-496 [27756]
    Other proteins in same PDB: d1d7fa1, d1d7fa2, d1d7fa4, d1d7fb1, d1d7fb2, d1d7fb4
    complexed with ca
2. Domains for 1ded:
  1. Domain d1deda3: 1ded A:407-496 [27757]
    Other proteins in same PDB: d1deda1, d1deda2, d1deda4, d1dedb1, d1dedb2, d1dedb4
    complexed with ca, qps
  2. Domain d1dedb3: 1ded B:407-496 [27758]
    Other proteins in same PDB: d1deda1, d1deda2, d1deda4, d1dedb1, d1dedb2, d1dedb4
    complexed with ca, qps
3. Domains for 1i75:
  1. Domain d1i75a3: 1i75 A:407-496 [61871]
    Other proteins in same PDB: d1i75a1, d1i75a2, d1i75a4, d1i75b1, d1i75b2, d1i75b4
    complexed with ca, noj
  2. Domain d1i75b3: 1i75 B:407-496 [61875]
    Other proteins in same PDB: d1i75a1, d1i75a2, d1i75a4, d1i75b1, d1i75b2, d1i75b4
    complexed with ca, noj
4. Domains for 1pam:
  1. Domain d1pama3: 1pam A:407-496 [27753]
    Other proteins in same PDB: d1pama1, d1pama2, d1pama4, d1pamb1, d1pamb2, d1pamb4
    complexed with ca
  2. Domain d1pamb3: 1pam B:407-496 [27754]
    Other proteins in same PDB: d1pama1, d1pama2, d1pama4, d1pamb1, d1pamb2, d1pamb4
    complexed with ca
5. Domains for 1v3j:
  1. Domain d1v3ja3: 1v3j A:407-496 [108307]
    Other proteins in same PDB: d1v3ja1, d1v3ja2, d1v3ja4, d1v3jb1, d1v3jb2, d1v3jb4
    complexed with ca; mutant
  2. Domain d1v3jb3: 1v3j B:407-496 [108311]
    Other proteins in same PDB: d1v3ja1, d1v3ja2, d1v3ja4, d1v3jb1, d1v3jb2, d1v3jb4
    complexed with ca; mutant
6. Domains for 1v3k:
  1. Domain d1v3ka3: 1v3k A:407-496 [108315]
    Other proteins in same PDB: d1v3ka1, d1v3ka2, d1v3ka4, d1v3kb1, d1v3kb2, d1v3kb4
    complexed with ca; mutant
  2. Domain d1v3kb3: 1v3k B:407-496 [108319]
    Other proteins in same PDB: d1v3ka1, d1v3ka2, d1v3ka4, d1v3kb1, d1v3kb2, d1v3kb4
    complexed with ca; mutant
7. Domains for 1v3l:
  1. Domain d1v3la3: 1v3l A:407-496 [108323]
    Other proteins in same PDB: d1v3la1, d1v3la2, d1v3la4, d1v3lb1, d1v3lb2, d1v3lb4
    complexed with aci, ca, gal, glc, gld; mutant
  2. Domain d1v3lb3: 1v3l B:407-496 [108327]
    Other proteins in same PDB: d1v3la1, d1v3la2, d1v3la4, d1v3lb1, d1v3lb2, d1v3lb4
    complexed with aci, ca, gal, glc, gld; mutant
8. Domains for 1v3m:
  1. Domain d1v3ma3: 1v3m A:407-496 [108331]
    Other proteins in same PDB: d1v3ma1, d1v3ma2, d1v3ma4, d1v3mb1, d1v3mb2, d1v3mb4
    complexed with aci, ca, gal, glc, gld; mutant
  2. Domain d1v3mb3: 1v3m B:407-496 [108335]
    Other proteins in same PDB: d1v3ma1, d1v3ma2, d1v3ma4, d1v3mb1, d1v3mb2, d1v3mb4
    complexed with aci, ca, gal, glc, gld; mutant
Bacillus stearothermophilus [TaxId:1422] [51020] (1 PDB entry)
- Domain for 1cyg:
  - Domain d1cyga3: 1cyg A:403-491 [27750]
    Other proteins in same PDB: d1cyga1, d1cyga2, d1cyga4
    complexed with ca
Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId:1422] [51021] (2 PDB entries)
1. Domain for 1qho:
  - Domain d1qhoa3: 1qho A:408-495 [27751]
    Other proteins in same PDB: d1qhoa1, d1qhoa2, d1qhoa4
    complexed with abd, ca, mal, so4
2. Domain for 1qhp:
  - Domain d1qhpa3: 1qhp A:408-495 [27752]
    Other proteins in same PDB: d1qhpa1, d1qhpa2, d1qhpa4
    complexed with ca, mal, so4
Thermoanaerobacterium thermosulfurigenes, EM1 [TaxId:33950] [51023] (4 PDB entries)
1. Domain for 1a47:
  - Domain d1a47a3: 1a47 A:407-495 [27760]
    Other proteins in same PDB: d1a47a1, d1a47a2, d1a47a4
    complexed with adh, ca, g6d, glc
2. Domain for 1ciu:
  - Domain d1ciua3: 1ciu A:407-495 [27759]
    Other proteins in same PDB: d1ciua1, d1ciua2, d1ciua4
    complexed with ca
3. Domain for 3bmv:
  - Domain d3bmva3: 3bmv A:407-495 [155418]
    Other proteins in same PDB: d3bmva1, d3bmva2, d3bmva4
    automated match to d3bmva3
    complexed with ca, gol, so4; mutant
4. Domain for 3bmw:
  - Domain d3bmwa3: 3bmw A:407-495 [155422]
    Other proteins in same PDB: d3bmwa1, d3bmwa2, d3bmwa4
    automated match to d3bmva3
    complexed with aci, ca, cl, g6d, glc, gol, so4; mutant

More info for Protein Cyclodextrin glycosyltransferase from b.71.1.1: alpha-Amylases, C-terminal beta-sheet domain

Timeline for Protein Cyclodextrin glycosyltransferase from b.71.1.1: alpha-Amylases, C-terminal beta-sheet domain:

Protein Cyclodextrin glycosyltransferase from b.71.1.1: alpha-Amylases, C-terminal beta-sheet domain first appeared (with stable ids) in SCOP 1.55
Protein Cyclodextrin glycosyltransferase from b.71.1.1: alpha-Amylases, C-terminal beta-sheet domain appears in SCOPe 2.06
Protein Cyclodextrin glycosyltransferase from b.71.1.1: alpha-Amylases, C-terminal beta-sheet domain appears in the current release, SCOPe 2.08