Species:

1. Foot-and-mouth disease virus [TaxId:12110] [159189] (2 PDB entries) Uniprot P49303 1657-1755! Uniprot P49303 1657-1857

   1. Domain for 2bhg:

      • Domain d2bhga1: 2bhg A:7-205 [146141] Other proteins in same PDB: d2bhgb_

   2. Domain for 2j92:

      • Domain d2j92a1: 2j92 A:7-207 [147933] Other proteins in same PDB: d2j92b_ mutant

2. Human coxsackievirus a16 [TaxId:31704] [189721] (3 PDB entries)

   1. Domain for 3sj8:

      • Domain d3sj8a_: 3sj8 A: [185427] automated match to d1l1na_

   2. Domain for 3sj9:

      • Domain d3sj9a_: 3sj9 A: [185428] automated match to d1l1na_ mutant

   3. Domain for 3sji:

      • Domain d3sjia_: 3sji A: [185429] automated match to d1l1na_ complexed with ag7, na

3. Human enterovirus 71 [TaxId:39054] [189720] (3 PDB entries)

   1. Domains for 3osy:

      1. Domain d3osya1: 3osy A:1-181 [214524] Other proteins in same PDB: d3osya2, d3osyb2, d3osyc2, d3osyd2, d3osye2 automated match to d3zvfa_

      2. Domain d3osyb1: 3osy B:1-181 [214525] Other proteins in same PDB: d3osya2, d3osyb2, d3osyc2, d3osyd2, d3osye2 automated match to d3zvfa_

      3. Domain d3osyc1: 3osy C:1-181 [214526] Other proteins in same PDB: d3osya2, d3osyb2, d3osyc2, d3osyd2, d3osye2 automated match to d3zvfa_

      4. Domain d3osyd1: 3osy D:1-181 [214527] Other proteins in same PDB: d3osya2, d3osyb2, d3osyc2, d3osyd2, d3osye2 automated match to d3zvfa_

      5. Domain d3osye1: 3osy E:1-181 [214528] Other proteins in same PDB: d3osya2, d3osyb2, d3osyc2, d3osyd2, d3osye2 automated match to d3zvfa_

   2. Domain for 3sjk:

      • Domain d3sjka_: 3sjk A: [185430] automated match to d1l1na_ mutant

   3. Domains for 3sjo:

      1. Domain d3sjoa_: 3sjo A: [192793] automated match to d2vb0a_ complexed with ag7

      2. Domain d3sjob_: 3sjo B: [192794] automated match to d2vb0a_ complexed with ag7

      3. Domain d3sjoc_: 3sjo C: [192796] automated match to d2vb0a_ complexed with ag7

      4. Domain d3sjod_: 3sjo D: [185431] automated match to d1l1na_ complexed with ag7

      5. Domain d3sjoe_: 3sjo E: [185432] automated match to d1l1na_ complexed with ag7

      6. Domain d3sjof_: 3sjo F: [192791] automated match to d2vb0a_ complexed with ag7

      7. Domain d3sjog_: 3sjo G: [192792] automated match to d2vb0a_ complexed with ag7

      8. Domain d3sjoh_: 3sjo H: [192795] automated match to d2vb0a_ complexed with ag7

4. Human enterovirus b [TaxId:138949] [189732] (3 PDB entries)

   1. Domains for 3q3x:

      1. Domain d3q3xa1: 3q3x A:1-181 [184201] Other proteins in same PDB: d3q3xa2, d3q3xb2 automated match to d1l1na_ complexed with gol, mg

      2. Domain d3q3xb1: 3q3x B:1-180 [192798] Other proteins in same PDB: d3q3xa2, d3q3xb2 automated match to d2vb0a_ complexed with gol, mg

   2. Domains for 3q3y:

      1. Domain d3q3ya1: 3q3y A:1-180 [184202] Other proteins in same PDB: d3q3ya2, d3q3yb2 automated match to d1l1na_ complexed with edo, nh4, pi, xnv

      2. Domain d3q3yb1: 3q3y B:1-180 [184203] Other proteins in same PDB: d3q3ya2, d3q3yb2 automated match to d1l1na_ complexed with edo, nh4, pi, xnv

   3. Domains for 3ruo:

      1. Domain d3ruoa1: 3ruo A:1-182 [185190] Other proteins in same PDB: d3ruoa2, d3ruob2 automated match to d1l1na_ protein/RNA complex; complexed with ag7, cl, mg

      2. Domain d3ruob1: 3ruo B:1-180 [185191] Other proteins in same PDB: d3ruoa2, d3ruob2 automated match to d1l1na_ protein/RNA complex; complexed with ag7, cl, mg

5. Human hepatitis a virus hu/northern africa/mbb/1978 [TaxId:12100] [186929] (2 PDB entries)

   1. Domain for 2a4o:

      • Domain d2a4oa_: 2a4o A: [126161] automated match to d1qa7b_ complexed with ace, bbl

   2. Domain for 2cxv:

      • Domain d2cxva_: 2cxv A: [131012] automated match to d1qa7b_ complexed with bbl

6. Human hepatitis A virus [TaxId:208726] [50606] (5 PDB entries)

   1. Domains for 1hav:

      1. Domain d1hava_: 1hav A: [26423] complexed with cl

      2. Domain d1havb_: 1hav B: [26424] complexed with cl

   2. Domains for 1qa7:

      1. Domain d1qa7a_: 1qa7 A: [26425] complexed with dms, gol, ivf

      2. Domain d1qa7b_: 1qa7 B: [26426] complexed with dms, gol, ivf

      3. Domain d1qa7c_: 1qa7 C: [26427] complexed with dms, gol, ivf

      4. Domain d1qa7d_: 1qa7 D: [26428] complexed with dms, gol, ivf

   3. Domain for 2h6m:

      • Domain d2h6ma_: 2h6m A: [136200] automated match to d1hava_ complexed with bbl

   4. Domain for 2h9h:

      • Domain d2h9ha_: 2h9h A: [136264] automated match to d1hava_ complexed with bbl

   5. Domain for 2hal:

      • Domain d2hala_: 2hal A: [136289] automated match to d1hava_ complexed with bbl

7. Human poliovirus 1 Mahoney [TaxId:12081] [74978] (2 PDB entries)

   1. Domains for 1l1n:

      1. Domain d1l1na_: 1l1n A: [73476]

      2. Domain d1l1nb_: 1l1n B: [73477]

   2. Domains for 2ijd:

      1. Domain d2ijd11: 2ijd 1:1-180 [137474] Other proteins in same PDB: d2ijd12, d2ijd22 automatically matched to d1l1na_ complexed with so4, zn

      2. Domain d2ijd21: 2ijd 2:1-180 [137476] Other proteins in same PDB: d2ijd12, d2ijd22 automatically matched to d1l1na_ complexed with so4, zn

8. Human rhinovirus 2 [TaxId:12130] [50605] (5 PDB entries)

   1. Domain for 1cqq:

      • Domain d1cqqa_: 1cqq A: [26422] complexed with ag7

   2. Domain for 5fx5:

      • Domain d5fx5a_: 5fx5 A: [318743] automated match to d1cqqa_ complexed with gol, hov, pg4, pge

   3. Domain for 5fx6:

      • Domain d5fx6a_: 5fx6 A: [318742] automated match to d1cqqa_ complexed with 6oy

   4. Domain for 6ffn:

      • Domain d6ffna1: 6ffn A:1-180 [350699] Other proteins in same PDB: d6ffna2 automated match to d5fx6a_ complexed with d8k, dms, gol, so4

   5. Domain for 6ffs:

      • Domain d6ffsa1: 6ffs A:1-180 [350751] Other proteins in same PDB: d6ffsa2 automated match to d5fx6a_ complexed with d8e, so4

9. Human rhinovirus sp. [TaxId:169066] [189940] (1 PDB entry)

   • Domain for 2xya:

     • Domain d2xyaa1: 2xya A:1-180 [170475] Other proteins in same PDB: d2xyaa2 automated match to d1cqqa_ complexed with 7l4

More info for Protein 3C cysteine protease (picornain 3C) from b.47.1.4: Viral cysteine protease of trypsin fold

Timeline for Protein 3C cysteine protease (picornain 3C) from b.47.1.4: Viral cysteine protease of trypsin fold:

• Protein 3C cysteine protease (picornain 3C) from b.47.1.4: Viral cysteine protease of trypsin fold first appeared (with stable ids) in SCOP 1.55
  
• Protein 3C cysteine protease (picornain 3C) from b.47.1.4: Viral cysteine protease of trypsin fold appears in SCOPe 2.07