Lineage for Protein: Viral capsid protein

  1. Root: SCOP 1.73
  2. 651986Class b: All beta proteins [48724] (165 folds)
  3. 670182Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily)
    barrel, closed; n=6, S=8; greek-key
    duplication: consists of two domains of the same fold
  4. 670183Superfamily b.47.1: Trypsin-like serine proteases [50494] (4 families) (S)
  5. 671537Family b.47.1.3: Viral proteases [50596] (4 proteins)
    beta sheet in the first domain is opened rather than forms a barrel
  6. 671589Protein Viral capsid protein [50597] (3 species)

Species:

  1. 671590Semliki forest virus [TaxId:11033] [50599] (2 PDB entries)
    1. Domains for 1vcp:
      1. 671591Domain d1vcpa_: 1vcp A: [26395]
      2. 671592Domain d1vcpb_: 1vcp B: [26396]
      3. 671593Domain d1vcpc_: 1vcp C: [26397]
        complexed with hg
    2. Domains for 1vcq:
      1. 671594Domain d1vcqa_: 1vcq A: [26398]
      2. 671595Domain d1vcqb_: 1vcq B: [26399]
  2. 671596Sindbis virus [TaxId:11034] [50598] (11 PDB entries)
    1. Domain for 1kxa:
    2. Domain for 1kxb:
    3. Domain for 1kxc:
    4. Domain for 1kxd:
    5. Domain for 1kxe:
    6. Domain for 1kxf:
    7. Domains for 1svp:
      1. 671597Domain d1svpa_: 1svp A: [26384]
      2. 671598Domain d1svpb_: 1svp B: [26385]
        mutant
    8. Domains for 1wyk:
      1. 671599Domain d1wyka_: 1wyk A: [26386]
      2. 671600Domain d1wykb_: 1wyk B: [26387]
      3. 671601Domain d1wykc_: 1wyk C: [26388]
      4. 671602Domain d1wykd_: 1wyk D: [26389]
        complexed with dio, for
    9. Domains for 1z8y:
      1. 671612Domain d1z8yq1: 1z8y Q:114-264 [124728]
        automatically matched to d1kxf__
      2. 671613Domain d1z8yr1: 1z8y R:114-264 [124729]
        automatically matched to d1kxf__
      3. 671614Domain d1z8ys1: 1z8y S:114-264 [124730]
        automatically matched to d1kxf__
      4. 671615Domain d1z8yt1: 1z8y T:114-264 [124731]
        automatically matched to d1kxf__
    10. Domain for 2snv:
    11. Domains for 2snw:
      1. 671605Domain d2snwa_: 2snw A: [26381]
      2. 671606Domain d2snwb_: 2snw B: [26382]
  3. 671616Venezuelan equine encephalitis virus [TaxId:11036] [89347] (2 PDB entries)
    1. Domains for 1ep5:
      1. 671617Domain d1ep5a_: 1ep5 A: [83186]
      2. 671618Domain d1ep5b_: 1ep5 B: [83187]
      3. 671619Domain d1ep5c_: 1ep5 C: [83188]
        complexed with so4, ure
    2. Domains for 1ep6:
      1. 671620Domain d1ep6a_: 1ep6 A: [83189]
      2. 671621Domain d1ep6b_: 1ep6 B: [83190]
      3. 671622Domain d1ep6c_: 1ep6 C: [83191]

More info for Protein Viral capsid protein from b.47.1.3: Viral proteases

Timeline for Protein Viral capsid protein from b.47.1.3: Viral proteases: