SCOP 1.69: Protein: Viral capsid protein

Lineage for Protein: Viral capsid protein

Root: SCOP 1.69
Class b: All beta proteins [48724] (144 folds)
Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily)
barrel, closed; n=6, S=8; greek-key
duplication: consists of two domains of the same fold
Superfamily b.47.1: Trypsin-like serine proteases [50494] (4 families)
Family b.47.1.3: Viral proteases [50596] (4 proteins)
beta sheet in the first domain is opened rather than forms a barrel
Protein Viral capsid protein [50597] (3 species)

Species:

Semliki forest virus [TaxId:11033] [50599] (2 PDB entries)
1. Domains for 1vcp:
  1. Domain d1vcpa_: 1vcp A: [26395]
  2. Domain d1vcpb_: 1vcp B: [26396]
  3. Domain d1vcpc_: 1vcp C: [26397]
2. Domains for 1vcq:
  1. Domain d1vcqa_: 1vcq A: [26398]
  2. Domain d1vcqb_: 1vcq B: [26399]
Sindbis virus [TaxId:11034] [50598] (10 PDB entries)
1. Domain for 1kxa:
  - Domain d1kxa__: 1kxa - [26383]
2. Domain for 1kxb:
  - Domain d1kxb__: 1kxb - [26390]
3. Domain for 1kxc:
  - Domain d1kxc__: 1kxc - [26391]
4. Domain for 1kxd:
  - Domain d1kxd__: 1kxd - [26392]
5. Domain for 1kxe:
  - Domain d1kxe__: 1kxe - [26393]
6. Domain for 1kxf:
  - Domain d1kxf__: 1kxf - [26380]
7. Domains for 1svp:
  1. Domain d1svpa_: 1svp A: [26384]
  2. Domain d1svpb_: 1svp B: [26385]
8. Domains for 1wyk:
  1. Domain d1wyka_: 1wyk A: [26386]
  2. Domain d1wykb_: 1wyk B: [26387]
  3. Domain d1wykc_: 1wyk C: [26388]
  4. Domain d1wykd_: 1wyk D: [26389]
9. Domain for 2snv:
  - Domain d2snv__: 2snv - [26394]
10. Domains for 2snw:
  1. Domain d2snwa_: 2snw A: [26381]
  2. Domain d2snwb_: 2snw B: [26382]
Venezuelan equine encephalitis virus [TaxId:11036] [89347] (2 PDB entries)
1. Domains for 1ep5:
  1. Domain d1ep5a_: 1ep5 A: [83186]
  2. Domain d1ep5b_: 1ep5 B: [83187]
  3. Domain d1ep5c_: 1ep5 C: [83188]
2. Domains for 1ep6:
  1. Domain d1ep6a_: 1ep6 A: [83189]
  2. Domain d1ep6b_: 1ep6 B: [83190]
  3. Domain d1ep6c_: 1ep6 C: [83191]

More info for Protein Viral capsid protein from b.47.1.3: Viral proteases

Timeline for Protein Viral capsid protein from b.47.1.3: Viral proteases:

Protein Viral capsid protein from b.47.1.3: Viral proteases first appeared (with stable ids) in SCOP 1.55
Protein Viral capsid protein from b.47.1.3: Viral proteases appears in SCOP 1.67
Protein Viral capsid protein from b.47.1.3: Viral proteases appears in SCOP 1.71
Protein Viral capsid protein from b.47.1.3: Viral proteases appears in the current release, SCOPe 2.08