SCOPe 2.04: Family b.40.4.6: DNA ligase/mRNA capping enzyme postcatalytic domain

Lineage for Family b.40.4.6: DNA ligase/mRNA capping enzyme postcatalytic domain

1. Root: SCOPe 2.04

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.40: OB-fold [50198] (16 superfamilies)
   barrel, closed or partly opened n=5, S=10 or S=8; greek-key

4. Superfamily b.40.4: Nucleic acid-binding proteins [50249] (17 families)

5. Family b.40.4.6: DNA ligase/mRNA capping enzyme postcatalytic domain [50307] (5 proteins)

Proteins:

1. ATP-dependent DNA ligase [50310] (2 species)

   1. Species Bacteriophage T7 [TaxId:10760] [50311] (1 PDB entry)

   2. Species Chlorella virus PBCV-1 [TaxId:10506] [50312] (4 PDB entries)

2. DNA ligase I (LIG1) [117202] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [117203] (1 PDB entry)
     Uniprot P18858 262-901

3. mRNA capping enzyme alpha subunit [89330] (1 species)

   • Species Yeast (Candida albicans) [TaxId:5476] [89331] (1 PDB entry)

4. NAD+-dependent DNA ligase [50313] (1 species)

   • Species Thermus filiformis [TaxId:276] [50314] (2 PDB entries)

5. RNA guanylyltransferase (mRNA capping enzyme) [50308] (1 species)

   • Species Chlorella virus PBCV-1 [TaxId:10506] [50309] (3 PDB entries)

More info for Family b.40.4.6: DNA ligase/mRNA capping enzyme postcatalytic domain

Timeline for Family b.40.4.6: DNA ligase/mRNA capping enzyme postcatalytic domain:

• Family b.40.4.6: DNA ligase/mRNA capping enzyme postcatalytic domain first appeared (with stable ids) in SCOP 1.55, called Family b.40.4.6: DNA ligase/mRNA capping enzyme, domain 2
  
• Family b.40.4.6: DNA ligase/mRNA capping enzyme postcatalytic domain appears in SCOPe 2.03
  
• Family b.40.4.6: DNA ligase/mRNA capping enzyme postcatalytic domain appears in SCOPe 2.05
  
• Family b.40.4.6: DNA ligase/mRNA capping enzyme postcatalytic domain appears in the current release, SCOPe 2.08