Lineage for Superfamily b.40.4: Nucleic acid-binding proteins

  1. Root: SCOP 1.67
  2. 362614Class b: All beta proteins [48724] (141 folds)
  3. 373898Fold b.40: OB-fold [50198] (10 superfamilies)
    barrel, closed or partly opened n=5, S=10 or S=8; greek-key
  4. 374537Superfamily b.40.4: Nucleic acid-binding proteins [50249] (12 families) (S)

Families:

  1. 374538b.40.4.1: Anticodon-binding domain [50250] (2 proteins)
    barrel, closed; n=5, S=10
  2. 374580b.40.4.2: DNA helicase RuvA subunit, N-terminal domain [50259] (1 protein)
    barrel, closed; n=5, S=10
  3. 374604b.40.4.3: Single strand DNA-binding domain, SSB [50263] (10 proteins)
    barrel, closed; n=5, S=10
  4. 374760b.40.4.4: Myf domain [50277] (6 proteins)
  5. 374797b.40.4.5: Cold shock DNA-binding domain-like [50282] (17 proteins)
    barrel, closed; n=5, S=8
  6. 374958b.40.4.6: DNA ligase/mRNA capping enzyme, domain 2 [50307] (4 proteins)
  7. 374982b.40.4.7: Phage ssDNA-binding proteins [50315] (3 proteins)
    barrel, open; n*=5, S*=8; the members' structures vary greater that those from cellular organisms
  8. 375017b.40.4.8: RNA polymerase subunit RBP8 [50321] (1 protein)
    duplication; contains tandem repeat of two incomplete OB-folds; forms a single barrel; n=8, S=10
  9. 375025b.40.4.9: RecG "wedge" domain [69259] (1 protein)
  10. 375029b.40.4.10: Hypothetical protein MTH1 (MT0001), insert domain [74955] (1 protein)
  11. 375034b.40.4.11: DNA replication initiator (cdc21/cdc54) N-terminal domain [89332] (1 protein)
  12. 375043b.40.4.12: TRAM domain [101768] (1 protein)
    Pfam 01938

More info for Superfamily b.40.4: Nucleic acid-binding proteins

Timeline for Superfamily b.40.4: Nucleic acid-binding proteins: