Lineage for Fold b.40: OB-fold

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2381452Fold b.40: OB-fold [50198] (17 superfamilies)
    barrel, closed or partly opened n=5, S=10 or S=8; greek-key

Superfamilies:

  1. 2381453b.40.1: Staphylococcal nuclease [50199] (1 family) (S)
  2. 2381771b.40.2: Bacterial enterotoxins [50203] (3 families) (S)
  3. 2382696b.40.3: TIMP-like [50242] (4 families) (S)
  4. 2382744b.40.4: Nucleic acid-binding proteins [50249] (18 families) (S)
  5. 2384029b.40.5: Inorganic pyrophosphatase [50324] (2 families) (S)
  6. 2384263b.40.6: MOP-like [50331] (4 families) (S)
  7. 2384422b.40.7: CheW-like [50341] (2 families) (S)
    automatically mapped to Pfam PF01584
  8. 2384445b.40.8: gp5 N-terminal domain-like [69255] (1 family) (S)
  9. 2384453b.40.9: Heme chaperone CcmE [82093] (1 family) (S)
    automatically mapped to Pfam PF03100
  10. 2384462b.40.10: Hypothetical protein YgiW [101756] (1 family) (S)
    automatically mapped to Pfam PF04076
  11. 2384467b.40.11: TM0957-like [141318] (1 family) (S)
    extra N-terminal region and large insertion after strand 3 together form an alpha-helical subdomain
    automatically mapped to Pfam PF10054
  12. 2384475b.40.12: NfeD domain-like [141322] (1 family) (S)
    close structural similarity to some members of the Nucleic acid-binding OB-fold proteins, possibly related to this superfamily
    automatically mapped to Pfam PF01957
  13. 2384480b.40.13: BC4932-like [159121] (1 family) (S)
    automatically mapped to Pfam PF06486
  14. 2384488b.40.14: HupF/HypC-like [159127] (1 family) (S)
    contains extra C-terminal helix packed against the beta-barrel side
    automatically mapped to Pfam PF01455
  15. 2384504b.40.15: EutN/CcmL-like [159133] (2 families) (S)
    homohexameric unit
  16. 2384602b.40.16: HIN-2000 domain-like [159141] (2 families) (S)
    duplication: tandem repeat of two OB-fold domains
  17. 2384668b.40.17: Proteasome regulatory subunits PAN/Rpt, OB-fold domain [345919] (1 family) (S)

More info for Fold b.40: OB-fold

Timeline for Fold b.40: OB-fold: