SCOPe 2.05: Protein: D1 core SNRNP protein

Lineage for Protein: D1 core SNRNP protein

Root: SCOPe 2.05
Class b: All beta proteins [48724] (176 folds)
Fold b.38: Sm-like fold [50181] (5 superfamilies)
core: barrel, open; n*=4, S*=8; meander; SH3-like topology
Superfamily b.38.1: Sm-like ribonucleoproteins [50182] (7 families)
Family b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP [50183] (8 proteins)
forms homo and heteroheptameric ring structures
Protein D1 core SNRNP protein [50184] (2 species)

Species:

Human (Homo sapiens) [TaxId:9606] [50185] (5 PDB entries)

Domain for 1b34:
- Domain d1b34a_: 1b34 A: [24796]
  Other proteins in same PDB: d1b34b_
  protein/RNA complex

Domains for 1vu2:

Domain d1vu2a_: 1vu2 A: [240850]
Other proteins in same PDB: d1vu24_, d1vu2b_, d1vu2d_, d1vu2f_, d1vu2h_, d1vu2j_, d1vu2l_, d1vu2n_, d1vu2p_, d1vu2r_, d1vu2t_, d1vu2v_, d1vu2x_, d1vu2z_
complexed with so4
complexed with so4

Domain d1vu2g_: 1vu2 g: [240854]
Other proteins in same PDB: d1vu24_, d1vu2b_, d1vu2d_, d1vu2f_, d1vu2h_, d1vu2j_, d1vu2l_, d1vu2n_, d1vu2p_, d1vu2r_, d1vu2t_, d1vu2v_, d1vu2x_, d1vu2z_
complexed with so4
complexed with so4

Domain d1vu2i_: 1vu2 I: [240856]
Other proteins in same PDB: d1vu24_, d1vu2b_, d1vu2d_, d1vu2f_, d1vu2h_, d1vu2j_, d1vu2l_, d1vu2n_, d1vu2p_, d1vu2r_, d1vu2t_, d1vu2v_, d1vu2x_, d1vu2z_
complexed with so4
complexed with so4

Domain d1vu2o_: 1vu2 o: [240860]
Other proteins in same PDB: d1vu24_, d1vu2b_, d1vu2d_, d1vu2f_, d1vu2h_, d1vu2j_, d1vu2l_, d1vu2n_, d1vu2p_, d1vu2r_, d1vu2t_, d1vu2v_, d1vu2x_, d1vu2z_
complexed with so4
complexed with so4

Domain d1vu2q_: 1vu2 Q: [240862]
Other proteins in same PDB: d1vu24_, d1vu2b_, d1vu2d_, d1vu2f_, d1vu2h_, d1vu2j_, d1vu2l_, d1vu2n_, d1vu2p_, d1vu2r_, d1vu2t_, d1vu2v_, d1vu2x_, d1vu2z_
complexed with so4
complexed with so4

Domain d1vu2w_: 1vu2 w: [240866]
Other proteins in same PDB: d1vu24_, d1vu2b_, d1vu2d_, d1vu2f_, d1vu2h_, d1vu2j_, d1vu2l_, d1vu2n_, d1vu2p_, d1vu2r_, d1vu2t_, d1vu2v_, d1vu2x_, d1vu2z_
complexed with so4
complexed with so4

Domain d1vu2y_: 1vu2 Y: [240868]
Other proteins in same PDB: d1vu24_, d1vu2b_, d1vu2d_, d1vu2f_, d1vu2h_, d1vu2j_, d1vu2l_, d1vu2n_, d1vu2p_, d1vu2r_, d1vu2t_, d1vu2v_, d1vu2x_, d1vu2z_
complexed with so4
complexed with so4

Domains for 1vu3:

Domain d1vu3a_: 1vu3 A: [240870]
Other proteins in same PDB: d1vu3b_, d1vu3d_, d1vu3f_, d1vu3h_, d1vu3j_, d1vu3l_, d1vu3n_, d1vu3p_, d1vu3r_, d1vu3t_, d1vu3v_, d1vu3x_, d1vu3z_
complexed with so4
complexed with so4

Domain d1vu3g_: 1vu3 g: [240874]
Other proteins in same PDB: d1vu3b_, d1vu3d_, d1vu3f_, d1vu3h_, d1vu3j_, d1vu3l_, d1vu3n_, d1vu3p_, d1vu3r_, d1vu3t_, d1vu3v_, d1vu3x_, d1vu3z_
complexed with so4
complexed with so4

Domain d1vu3i_: 1vu3 I: [240876]
Other proteins in same PDB: d1vu3b_, d1vu3d_, d1vu3f_, d1vu3h_, d1vu3j_, d1vu3l_, d1vu3n_, d1vu3p_, d1vu3r_, d1vu3t_, d1vu3v_, d1vu3x_, d1vu3z_
complexed with so4
complexed with so4

Domain d1vu3o_: 1vu3 o: [240880]
Other proteins in same PDB: d1vu3b_, d1vu3d_, d1vu3f_, d1vu3h_, d1vu3j_, d1vu3l_, d1vu3n_, d1vu3p_, d1vu3r_, d1vu3t_, d1vu3v_, d1vu3x_, d1vu3z_
complexed with so4
complexed with so4

Domain d1vu3q_: 1vu3 Q: [240882]
Other proteins in same PDB: d1vu3b_, d1vu3d_, d1vu3f_, d1vu3h_, d1vu3j_, d1vu3l_, d1vu3n_, d1vu3p_, d1vu3r_, d1vu3t_, d1vu3v_, d1vu3x_, d1vu3z_
complexed with so4
complexed with so4

Domain d1vu3y_: 1vu3 Y: [240887]
Other proteins in same PDB: d1vu3b_, d1vu3d_, d1vu3f_, d1vu3h_, d1vu3j_, d1vu3l_, d1vu3n_, d1vu3p_, d1vu3r_, d1vu3t_, d1vu3v_, d1vu3x_, d1vu3z_
complexed with so4
complexed with so4

Domain for 3s6n:
- Domain d3s6na_: 3s6n A: [200589]
  Other proteins in same PDB: d3s6nb_, d3s6nf_, d3s6ng_
  automated match to d1b34a_
  protein/RNA complex

Domains for 4f77:

Domain d4f77a_: 4f77 A: [251904]
Other proteins in same PDB: d4f774_, d4f77b_, d4f77d_, d4f77f_, d4f77h_, d4f77j_, d4f77l_, d4f77n_, d4f77p_, d4f77r_, d4f77t_, d4f77v_, d4f77x_, d4f77z_
complexed with so4
complexed with so4

Domain d4f77g_: 4f77 g: [251908]
Other proteins in same PDB: d4f774_, d4f77b_, d4f77d_, d4f77f_, d4f77h_, d4f77j_, d4f77l_, d4f77n_, d4f77p_, d4f77r_, d4f77t_, d4f77v_, d4f77x_, d4f77z_
complexed with so4
complexed with so4

Domain d4f77i_: 4f77 I: [251910]
Other proteins in same PDB: d4f774_, d4f77b_, d4f77d_, d4f77f_, d4f77h_, d4f77j_, d4f77l_, d4f77n_, d4f77p_, d4f77r_, d4f77t_, d4f77v_, d4f77x_, d4f77z_
complexed with so4
complexed with so4

Domain d4f77o_: 4f77 o: [251914]
Other proteins in same PDB: d4f774_, d4f77b_, d4f77d_, d4f77f_, d4f77h_, d4f77j_, d4f77l_, d4f77n_, d4f77p_, d4f77r_, d4f77t_, d4f77v_, d4f77x_, d4f77z_
complexed with so4
complexed with so4

Domain d4f77q_: 4f77 Q: [251916]
Other proteins in same PDB: d4f774_, d4f77b_, d4f77d_, d4f77f_, d4f77h_, d4f77j_, d4f77l_, d4f77n_, d4f77p_, d4f77r_, d4f77t_, d4f77v_, d4f77x_, d4f77z_
complexed with so4
complexed with so4

Domain d4f77w_: 4f77 w: [251920]
Other proteins in same PDB: d4f774_, d4f77b_, d4f77d_, d4f77f_, d4f77h_, d4f77j_, d4f77l_, d4f77n_, d4f77p_, d4f77r_, d4f77t_, d4f77v_, d4f77x_, d4f77z_
complexed with so4
complexed with so4

Domain d4f77y_: 4f77 Y: [251922]
Other proteins in same PDB: d4f774_, d4f77b_, d4f77d_, d4f77f_, d4f77h_, d4f77j_, d4f77l_, d4f77n_, d4f77p_, d4f77r_, d4f77t_, d4f77v_, d4f77x_, d4f77z_
complexed with so4
complexed with so4

Mouse (Mus musculus) [TaxId:10090] [224861] (1 PDB entry)
- Domains for 4f7u:
  1. Domain d4f7ua_: 4f7u A: [221062]
    Other proteins in same PDB: d4f7ub_, d4f7ud_, d4f7uf_, d4f7ug_, d4f7ui_, d4f7uj_
    automated match to d1b34a_
    complexed with p6g
  2. Domain d4f7uc_: 4f7u C: [221064]
    Other proteins in same PDB: d4f7ub_, d4f7ud_, d4f7uf_, d4f7ug_, d4f7ui_, d4f7uj_
    automated match to d1b34a_
    complexed with p6g

More info for Protein D1 core SNRNP protein from b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP

Timeline for Protein D1 core SNRNP protein from b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP:

Protein D1 core SNRNP protein from b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP first appeared (with stable ids) in SCOP 1.55
Protein D1 core SNRNP protein from b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP appears in SCOPe 2.04
Protein D1 core SNRNP protein from b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP appears in SCOPe 2.06
Protein D1 core SNRNP protein from b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP appears in the current release, SCOPe 2.08