Lineage for Protein: Vibrio cholerae sialidase, N-terminal and insertion domains

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2042196Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
    sandwich; 12-14 strands in 2 sheets; complex topology
  4. 2042197Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (26 families) (S)
  5. 2043544Family b.29.1.8: Vibrio cholerae sialidase, N-terminal and insertion domains [49965] (1 protein)
  6. 2043545Protein Vibrio cholerae sialidase, N-terminal and insertion domains [49966] (2 species)
    both domains have this fold
    rest of protein is beta-propeller of six sheets

Species:

  1. 2043546Vibrio cholerae [TaxId:666] [49967] (3 PDB entries)
    Uniprot P37060
    1. Domains for 1kit:
      1. 2043551Domain d1kita1: 1kit A:25-216 [24272]
        Other proteins in same PDB: d1kita3
        complexed with ca
      2. 2043552Domain d1kita2: 1kit A:347-543 [24273]
        Other proteins in same PDB: d1kita3
        complexed with ca
    2. Domains for 1w0o:
      1. 2043549Domain d1w0oa1: 1w0o A:25-216 [109035]
        Other proteins in same PDB: d1w0oa3
        complexed with ca, dan, sia
      2. 2043550Domain d1w0oa2: 1w0o A:347-543 [109036]
        Other proteins in same PDB: d1w0oa3
        complexed with ca, dan, sia
    3. Domains for 1w0p:
      1. 2043547Domain d1w0pa1: 1w0p A:25-216 [109038]
        Other proteins in same PDB: d1w0pa3
        complexed with ca, gol, sia, trs
      2. 2043548Domain d1w0pa2: 1w0p A:347-543 [109039]
        Other proteins in same PDB: d1w0pa3
        complexed with ca, gol, sia, trs
  2. 2298745Vibrio cholerae [TaxId:243277] [342046] (2 PDB entries)
    1. Domains for 6eks:
      1. 2298746Domain d6eksa1: 6eks A:51-242 [342047]
        Other proteins in same PDB: d6eksa2
        automated match to d1kita1
        complexed with ca, g39, gol
      2. 2298749Domain d6eksa3: 6eks A:373-569 [342050]
        Other proteins in same PDB: d6eksa2
        automated match to d1kita2
        complexed with ca, g39, gol
    2. Domains for 6eku:
      1. 2298752Domain d6ekua1: 6eku A:51-242 [342053]
        Other proteins in same PDB: d6ekua2
        automated match to d1kita1
        complexed with ca, gol, na, peg, zmr
      2. 2298754Domain d6ekua3: 6eku A:373-569 [342055]
        Other proteins in same PDB: d6ekua2
        automated match to d1kita2
        complexed with ca, gol, na, peg, zmr

More info for Protein Vibrio cholerae sialidase, N-terminal and insertion domains from b.29.1.8: Vibrio cholerae sialidase, N-terminal and insertion domains

Timeline for Protein Vibrio cholerae sialidase, N-terminal and insertion domains from b.29.1.8: Vibrio cholerae sialidase, N-terminal and insertion domains:

  • Protein Vibrio cholerae sialidase, N-terminal and insertion domains from b.29.1.8: Vibrio cholerae sialidase, N-terminal and insertion domains first appeared (with stable ids) in SCOP 1.55
  • Protein Vibrio cholerae sialidase, N-terminal and insertion domains from b.29.1.8: Vibrio cholerae sialidase, N-terminal and insertion domains appears in SCOPe 2.05