Lineage for Species: Human rhinovirus B 14 (HRV-14) [TaxId: 12131]

  1. Root: SCOPe 2.06
  2. 2021373Class b: All beta proteins [48724] (177 folds)
  3. 2086376Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2086604Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 2086605Family b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) [88634] (10 proteins)
    the order of the chains N-VP0-VP3-VP1-C is as in the polyprotein; VP0 is cleaved later upon capsid assembly to VP4 and VP2
    there is a different order in the shuffled genome of insect picorna-like proteins (Cricket paralysis virus)
  6. 2086723Protein Rhinovirus coat proteins [49670] (5 species)
  7. 2086776Species Human rhinovirus B 14 (HRV-14) [TaxId:12131] [49671] (33 PDB entries)

PDB entries in Species: Human rhinovirus B 14 (HRV-14) [TaxId: 12131]:

  1. Domain(s) for 1hri:
    1. 2086864Domain d1hri.1: 1hri 4:,2: [83062]
      complexed with s57
    2. 2086865Domain d1hri1_: 1hri 1: [23474]
      complexed with s57
    3. 2086866Domain d1hri3_: 1hri 3: [23476]
      complexed with s57
  2. Domain(s) for 1hrv:
    1. 2086831Domain d1hrv.1: 1hrv 4:,2: [83063]
      complexed with sdz
    2. 2086832Domain d1hrv1_: 1hrv 1: [23477]
      complexed with sdz
    3. 2086833Domain d1hrv3_: 1hrv 3: [23479]
      complexed with sdz
  3. Domain(s) for 1k5m:
    1. 2086780Domain d1k5m.1: 1k5m D:,B: [83093]
      grafted HIV-1 v3 loop in chain B
      complexed with sph
    2. 2086781Domain d1k5ma_: 1k5m A: [72078]
      grafted HIV-1 v3 loop in chain B
      complexed with sph
    3. 2086782Domain d1k5mc_: 1k5m C: [72080]
      grafted HIV-1 v3 loop in chain B
      complexed with sph
  4. Domain(s) for 1na1:
    1. 2086790Domain d1na1.1: 1na1 D:,B: [91742]
      complexed with w11
    2. 2086791Domain d1na1a_: 1na1 A: [91743]
      complexed with w11
    3. 2086792Domain d1na1c_: 1na1 C: [91744]
      complexed with w11
  5. Domain(s) for 1ncq:
    1. 2086777Domain d1ncq.1: 1ncq D:,B: [91802]
      complexed with w11
    2. 2086778Domain d1ncqa_: 1ncq A: [91803]
      complexed with w11
    3. 2086779Domain d1ncqc_: 1ncq C: [91804]
      complexed with w11
  6. Domain(s) for 1r08:
    1. 2086852Domain d1r08.1: 1r08 4:,2: [83109]
      complexed with w42
    2. 2086853Domain d1r081_: 1r08 1: [23483]
      complexed with w42
    3. 2086854Domain d1r083_: 1r08 3: [23485]
      complexed with w42
  7. Domain(s) for 1r09:
    1. 2086798Domain d1r09.1: 1r09 4:,2: [83110]
      complexed with dms, jen
    2. 2086799Domain d1r091_: 1r09 1: [23441]
      complexed with dms, jen
    3. 2086800Domain d1r093_: 1r09 3: [23443]
      complexed with dms, jen
  8. Domain(s) for 1rmu:
    1. 2086837Domain d1rmu.1: 1rmu 4:,2: [83113]
      complexed with trs; mutant
    2. 2086838Domain d1rmu1_: 1rmu 1: [23504]
      complexed with trs; mutant
    3. 2086839Domain d1rmu3_: 1rmu 3: [23506]
      complexed with trs; mutant
  9. Domain(s) for 1ruc:
    1. 2086867Domain d1ruc.1: 1ruc 4:,2: [83114]
      complexed with w35; mutant
    2. 2086868Domain d1ruc1_: 1ruc 1: [23513]
      complexed with w35; mutant
    3. 2086869Domain d1ruc3_: 1ruc 3: [23515]
      complexed with w35; mutant
  10. Domain(s) for 1rud:
    1. 2086795Domain d1rud.1: 1rud 4:,2: [83115]
      complexed with w84; mutant
    2. 2086796Domain d1rud1_: 1rud 1: [23444]
      complexed with w84; mutant
    3. 2086797Domain d1rud3_: 1rud 3: [23446]
      complexed with w84; mutant
  11. Domain(s) for 1rue:
    1. 2086825Domain d1rue.1: 1rue 4:,2: [83116]
      complexed with w35; mutant
    2. 2086826Domain d1rue1_: 1rue 1: [23468]
      complexed with w35; mutant
    3. 2086827Domain d1rue3_: 1rue 3: [23470]
      complexed with w35; mutant
  12. Domain(s) for 1ruf:
    1. 2086822Domain d1ruf.1: 1ruf 4:,2: [83117]
      mutant
    2. 2086823Domain d1ruf1_: 1ruf 1: [23471]
      mutant
    3. 2086824Domain d1ruf3_: 1ruf 3: [23473]
      mutant
  13. Domain(s) for 1rug:
    1. 2086843Domain d1rug.1: 1rug 4:,2: [83118]
      complexed with w35; mutant
    2. 2086844Domain d1rug1_: 1rug 1: [23495]
      complexed with w35; mutant
    3. 2086845Domain d1rug3_: 1rug 3: [23497]
      complexed with w35; mutant
  14. Domain(s) for 1ruh:
    1. 2086807Domain d1ruh.1: 1ruh 4:,2: [83119]
      complexed with w84; mutant
    2. 2086808Domain d1ruh1_: 1ruh 1: [23459]
      complexed with w84; mutant
    3. 2086809Domain d1ruh3_: 1ruh 3: [23461]
      complexed with w84; mutant
  15. Domain(s) for 1rui:
    1. 2086810Domain d1rui.1: 1rui 4:,2: [83120]
      complexed with w84; mutant
    2. 2086811Domain d1rui1_: 1rui 1: [23462]
      complexed with w84; mutant
    3. 2086812Domain d1rui3_: 1rui 3: [23464]
      complexed with w84; mutant
  16. Domain(s) for 1ruj:
    1. 2086828Domain d1ruj.1: 1ruj 4:,2: [83121]
      mutant
    2. 2086829Domain d1ruj1_: 1ruj 1: [23498]
      mutant
    3. 2086830Domain d1ruj3_: 1ruj 3: [23500]
      mutant
  17. Domain(s) for 1rvf:
    1. 2086870Domain d1rvf.1: 1rvf 4:,2: [83122]
      Other proteins in same PDB: d1rvfh_, d1rvfl_
      protein/RNA complex
    2. 2086871Domain d1rvf1_: 1rvf 1: [23516]
      Other proteins in same PDB: d1rvfh_, d1rvfl_
      protein/RNA complex
    3. 2086872Domain d1rvf3_: 1rvf 3: [23518]
      Other proteins in same PDB: d1rvfh_, d1rvfl_
      protein/RNA complex
  18. Domain(s) for 1vrh:
    1. 2086804Domain d1vrh.1: 1vrh 4:,2: [83130]
      protein/RNA complex; complexed with sd8
    2. 2086805Domain d1vrh1_: 1vrh 1: [23465]
      protein/RNA complex; complexed with sd8
    3. 2086806Domain d1vrh3_: 1vrh 3: [23467]
      protein/RNA complex; complexed with sd8
  19. Domain(s) for 2hwb:
    1. 2086846Domain d2hwb.1: 2hwb 4:,2: [83131]
      complexed with w91
    2. 2086847Domain d2hwb1_: 2hwb 1: [23507]
      complexed with w91
    3. 2086848Domain d2hwb3_: 2hwb 3: [23509]
      complexed with w91
  20. Domain(s) for 2hwc:
    1. 2086840Domain d2hwc.1: 2hwc 4:,2: [83132]
      complexed with w54
    2. 2086841Domain d2hwc1_: 2hwc 1: [23510]
      complexed with w54
    3. 2086842Domain d2hwc3_: 2hwc 3: [23512]
      complexed with w54
  21. Domain(s) for 2r04:
    1. 2086861Domain d2r04.1: 2r04 4:,2: [83138]
      complexed with w71
    2. 2086862Domain d2r041_: 2r04 1: [23486]
      complexed with w71
    3. 2086863Domain d2r043_: 2r04 3: [23488]
      complexed with w71
  22. Domain(s) for 2r06:
    1. 2086855Domain d2r06.1: 2r06 4:,2: [83139]
      complexed with w35
    2. 2086856Domain d2r061_: 2r06 1: [23492]
      complexed with w35
    3. 2086857Domain d2r063_: 2r06 3: [23494]
      complexed with w35
  23. Domain(s) for 2r07:
    1. 2086819Domain d2r07.1: 2r07 4:,2: [83140]
      complexed with w33
    2. 2086820Domain d2r071_: 2r07 1: [23447]
      complexed with w33
    3. 2086821Domain d2r073_: 2r07 3: [23449]
      complexed with w33
  24. Domain(s) for 2rm2:
    1. 2086816Domain d2rm2.1: 2rm2 4:,2: [83141]
      complexed with w43
    2. 2086817Domain d2rm21_: 2rm2 1: [23450]
      complexed with w43
    3. 2086818Domain d2rm23_: 2rm2 3: [23452]
      complexed with w43
  25. Domain(s) for 2rmu:
    1. 2086834Domain d2rmu.1: 2rmu 4:,2: [83142]
      mutant
    2. 2086835Domain d2rmu1_: 2rmu 1: [23501]
      mutant
    3. 2086836Domain d2rmu3_: 2rmu 3: [23503]
      mutant
  26. Domain(s) for 2rr1:
    1. 2086813Domain d2rr1.1: 2rr1 4:,2: [83143]
      complexed with w8r
    2. 2086814Domain d2rr11_: 2rr1 1: [23453]
      complexed with w8r
    3. 2086815Domain d2rr13_: 2rr1 3: [23455]
      complexed with w8r
  27. Domain(s) for 2rs1:
    1. 2086801Domain d2rs1.1: 2rs1 4:,2: [83144]
      complexed with w84
    2. 2086802Domain d2rs11_: 2rs1 1: [23456]
      complexed with w84
    3. 2086803Domain d2rs13_: 2rs1 3: [23458]
      complexed with w84
  28. Domain(s) for 2rs3:
    1. 2086849Domain d2rs3.1: 2rs3 4:,2: [83145]
      complexed with w59
    2. 2086850Domain d2rs31_: 2rs3 1: [23480]
      complexed with w59
    3. 2086851Domain d2rs33_: 2rs3 3: [23482]
      complexed with w59
  29. Domain(s) for 2rs5:
    1. 2086858Domain d2rs5.1: 2rs5 4:,2: [83146]
      complexed with w56
    2. 2086859Domain d2rs51_: 2rs5 1: [23489]
      complexed with w56
    3. 2086860Domain d2rs53_: 2rs5 3: [23491]
      complexed with w56
  30. Domain(s) for 4rhv:
    1. 2086785Domain d4rhv.1: 4rhv 4:,2: [83147]
    2. 2086786Domain d4rhv1_: 4rhv 1: [23438]
    3. 2086787Domain d4rhv3_: 4rhv 3: [23440]
  31. Domain(s) for 5w3e:
    1. 2086788Domain d5w3ea_: 5w3e A: [336698]
      Other proteins in same PDB: d5w3ee_, d5w3eg_
      automated match to d1k5ma_
    2. 2086789Domain d5w3eb_: 5w3e B: [336744]
      Other proteins in same PDB: d5w3ee_, d5w3eg_
      automated match to d1ncqc_
  32. Domain(s) for 5w3l:
    1. 2086793Domain d5w3la_: 5w3l A: [336702]
      Other proteins in same PDB: d5w3le_, d5w3lg_
      automated match to d1k5ma_
    2. 2086794Domain d5w3lb_: 5w3l B: [336722]
      Other proteins in same PDB: d5w3le_, d5w3lg_
      automated match to d1ncqc_
  33. Domain(s) for 5w3m:
    1. 2086783Domain d5w3ma_: 5w3m A: [336723]
      Other proteins in same PDB: d5w3me_, d5w3mg_
      automated match to d1ncqa_
    2. 2086784Domain d5w3mb_: 5w3m B: [336697]
      Other proteins in same PDB: d5w3me_, d5w3mg_
      automated match to d1ncqc_

More info for Species Human rhinovirus B 14 (HRV-14) [TaxId:12131] from b.121.4.1 Rhinovirus coat proteins

Timeline for Species Human rhinovirus B 14 (HRV-14) [TaxId:12131] from b.121.4.1 Rhinovirus coat proteins: