SCOPe 2.05: Species: Human rhinovirus B 14 (HRV-14) [TaxId: 12131]

Lineage for Species: Human rhinovirus B 14 (HRV-14) [TaxId: 12131]

Root: SCOPe 2.05
Class b: All beta proteins [48724] (176 folds)

Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies

Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families)

Family b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) [88634] (10 proteins)
the order of the chains N-VP0-VP3-VP1-C is as in the polyprotein; VP0 is cleaved later upon capsid assembly to VP4 and VP2
there is a different order in the shuffled genome of insect picorna-like proteins (Cricket paralysis virus)

Protein Rhinovirus coat proteins [49670] (5 species)
Species Human rhinovirus B 14 (HRV-14) [TaxId:12131] [49671] (30 PDB entries)

PDB entries in Species: Human rhinovirus B 14 (HRV-14) [TaxId: 12131]:

Domain(s) for 1hri:
1. Domain d1hri.1: 1hri 4:,2: [83062]
  complexed with s57
2. Domain d1hri1_: 1hri 1: [23474]
  complexed with s57
3. Domain d1hri3_: 1hri 3: [23476]
  complexed with s57
Domain(s) for 1hrv:
1. Domain d1hrv.1: 1hrv 4:,2: [83063]
  complexed with sdz
2. Domain d1hrv1_: 1hrv 1: [23477]
  complexed with sdz
3. Domain d1hrv3_: 1hrv 3: [23479]
  complexed with sdz
Domain(s) for 1k5m:
1. Domain d1k5m.1: 1k5m D:,B: [83093]
  grafted HIV-1 v3 loop in chain B
  complexed with sph
2. Domain d1k5ma_: 1k5m A: [72078]
  grafted HIV-1 v3 loop in chain B
  complexed with sph
3. Domain d1k5mc_: 1k5m C: [72080]
  grafted HIV-1 v3 loop in chain B
  complexed with sph
Domain(s) for 1na1:
1. Domain d1na1.1: 1na1 D:,B: [91742]
  complexed with w11
2. Domain d1na1a_: 1na1 A: [91743]
  complexed with w11
3. Domain d1na1c_: 1na1 C: [91744]
  complexed with w11
Domain(s) for 1ncq:
1. Domain d1ncq.1: 1ncq D:,B: [91802]
  complexed with w11
2. Domain d1ncqa_: 1ncq A: [91803]
  complexed with w11
3. Domain d1ncqc_: 1ncq C: [91804]
  complexed with w11
Domain(s) for 1r08:
1. Domain d1r08.1: 1r08 4:,2: [83109]
  complexed with w42
2. Domain d1r081_: 1r08 1: [23483]
  complexed with w42
3. Domain d1r083_: 1r08 3: [23485]
  complexed with w42
Domain(s) for 1r09:
1. Domain d1r09.1: 1r09 4:,2: [83110]
  complexed with dms, jen
2. Domain d1r091_: 1r09 1: [23441]
  complexed with dms, jen
3. Domain d1r093_: 1r09 3: [23443]
  complexed with dms, jen
Domain(s) for 1rmu:
1. Domain d1rmu.1: 1rmu 4:,2: [83113]
  complexed with trs; mutant
2. Domain d1rmu1_: 1rmu 1: [23504]
  complexed with trs; mutant
3. Domain d1rmu3_: 1rmu 3: [23506]
  complexed with trs; mutant
Domain(s) for 1ruc:
1. Domain d1ruc.1: 1ruc 4:,2: [83114]
  complexed with w35; mutant
2. Domain d1ruc1_: 1ruc 1: [23513]
  complexed with w35; mutant
3. Domain d1ruc3_: 1ruc 3: [23515]
  complexed with w35; mutant
Domain(s) for 1rud:
1. Domain d1rud.1: 1rud 4:,2: [83115]
  complexed with w84; mutant
2. Domain d1rud1_: 1rud 1: [23444]
  complexed with w84; mutant
3. Domain d1rud3_: 1rud 3: [23446]
  complexed with w84; mutant
Domain(s) for 1rue:
1. Domain d1rue.1: 1rue 4:,2: [83116]
  complexed with w35; mutant
2. Domain d1rue1_: 1rue 1: [23468]
  complexed with w35; mutant
3. Domain d1rue3_: 1rue 3: [23470]
  complexed with w35; mutant
Domain(s) for 1ruf:
1. Domain d1ruf.1: 1ruf 4:,2: [83117]
  mutant
2. Domain d1ruf1_: 1ruf 1: [23471]
  mutant
3. Domain d1ruf3_: 1ruf 3: [23473]
  mutant
Domain(s) for 1rug:
1. Domain d1rug.1: 1rug 4:,2: [83118]
  complexed with w35; mutant
2. Domain d1rug1_: 1rug 1: [23495]
  complexed with w35; mutant
3. Domain d1rug3_: 1rug 3: [23497]
  complexed with w35; mutant
Domain(s) for 1ruh:
1. Domain d1ruh.1: 1ruh 4:,2: [83119]
  complexed with w84; mutant
2. Domain d1ruh1_: 1ruh 1: [23459]
  complexed with w84; mutant
3. Domain d1ruh3_: 1ruh 3: [23461]
  complexed with w84; mutant
Domain(s) for 1rui:
1. Domain d1rui.1: 1rui 4:,2: [83120]
  complexed with w84; mutant
2. Domain d1rui1_: 1rui 1: [23462]
  complexed with w84; mutant
3. Domain d1rui3_: 1rui 3: [23464]
  complexed with w84; mutant
Domain(s) for 1ruj:
1. Domain d1ruj.1: 1ruj 4:,2: [83121]
  mutant
2. Domain d1ruj1_: 1ruj 1: [23498]
  mutant
3. Domain d1ruj3_: 1ruj 3: [23500]
  mutant
Domain(s) for 1rvf:
1. Domain d1rvf.1: 1rvf 4:,2: [83122]
  Other proteins in same PDB: d1rvfh_, d1rvfl_
  protein/RNA complex
2. Domain d1rvf1_: 1rvf 1: [23516]
  Other proteins in same PDB: d1rvfh_, d1rvfl_
  protein/RNA complex
3. Domain d1rvf3_: 1rvf 3: [23518]
  Other proteins in same PDB: d1rvfh_, d1rvfl_
  protein/RNA complex
Domain(s) for 1vrh:
1. Domain d1vrh.1: 1vrh 4:,2: [83130]
  protein/RNA complex; complexed with sd8
2. Domain d1vrh1_: 1vrh 1: [23465]
  protein/RNA complex; complexed with sd8
3. Domain d1vrh3_: 1vrh 3: [23467]
  protein/RNA complex; complexed with sd8
Domain(s) for 2hwb:
1. Domain d2hwb.1: 2hwb 4:,2: [83131]
  complexed with w91
2. Domain d2hwb1_: 2hwb 1: [23507]
  complexed with w91
3. Domain d2hwb3_: 2hwb 3: [23509]
  complexed with w91
Domain(s) for 2hwc:
1. Domain d2hwc.1: 2hwc 4:,2: [83132]
  complexed with w54
2. Domain d2hwc1_: 2hwc 1: [23510]
  complexed with w54
3. Domain d2hwc3_: 2hwc 3: [23512]
  complexed with w54
Domain(s) for 2r04:
1. Domain d2r04.1: 2r04 4:,2: [83138]
  complexed with w71
2. Domain d2r041_: 2r04 1: [23486]
  complexed with w71
3. Domain d2r043_: 2r04 3: [23488]
  complexed with w71
Domain(s) for 2r06:
1. Domain d2r06.1: 2r06 4:,2: [83139]
  complexed with w35
2. Domain d2r061_: 2r06 1: [23492]
  complexed with w35
3. Domain d2r063_: 2r06 3: [23494]
  complexed with w35
Domain(s) for 2r07:
1. Domain d2r07.1: 2r07 4:,2: [83140]
  complexed with w33
2. Domain d2r071_: 2r07 1: [23447]
  complexed with w33
3. Domain d2r073_: 2r07 3: [23449]
  complexed with w33
Domain(s) for 2rm2:
1. Domain d2rm2.1: 2rm2 4:,2: [83141]
  complexed with w43
2. Domain d2rm21_: 2rm2 1: [23450]
  complexed with w43
3. Domain d2rm23_: 2rm2 3: [23452]
  complexed with w43
Domain(s) for 2rmu:
1. Domain d2rmu.1: 2rmu 4:,2: [83142]
  mutant
2. Domain d2rmu1_: 2rmu 1: [23501]
  mutant
3. Domain d2rmu3_: 2rmu 3: [23503]
  mutant
Domain(s) for 2rr1:
1. Domain d2rr1.1: 2rr1 4:,2: [83143]
  complexed with w8r
2. Domain d2rr11_: 2rr1 1: [23453]
  complexed with w8r
3. Domain d2rr13_: 2rr1 3: [23455]
  complexed with w8r
Domain(s) for 2rs1:
1. Domain d2rs1.1: 2rs1 4:,2: [83144]
  complexed with w84
2. Domain d2rs11_: 2rs1 1: [23456]
  complexed with w84
3. Domain d2rs13_: 2rs1 3: [23458]
  complexed with w84
Domain(s) for 2rs3:
1. Domain d2rs3.1: 2rs3 4:,2: [83145]
  complexed with w59
2. Domain d2rs31_: 2rs3 1: [23480]
  complexed with w59
3. Domain d2rs33_: 2rs3 3: [23482]
  complexed with w59
Domain(s) for 2rs5:
1. Domain d2rs5.1: 2rs5 4:,2: [83146]
  complexed with w56
2. Domain d2rs51_: 2rs5 1: [23489]
  complexed with w56
3. Domain d2rs53_: 2rs5 3: [23491]
  complexed with w56
Domain(s) for 4rhv:
1. Domain d4rhv.1: 4rhv 4:,2: [83147]
2. Domain d4rhv1_: 4rhv 1: [23438]
3. Domain d4rhv3_: 4rhv 3: [23440]

More info for Species Human rhinovirus B 14 (HRV-14) [TaxId:12131] from b.121.4.1 Rhinovirus coat proteins

Timeline for Species Human rhinovirus B 14 (HRV-14) [TaxId:12131] from b.121.4.1 Rhinovirus coat proteins:

Species Human rhinovirus B 14 (HRV-14) [TaxId:12131] from b.121.4.1 Rhinovirus coat proteins first appeared (with stable ids) in SCOP 1.55, called Species Human rhinovirus 14 [TaxId:12131] from b.10.1.4 Rhinovirus coat protein
Species Human rhinovirus B 14 (HRV-14) [TaxId:12131] from b.121.4.1 Rhinovirus coat proteins appears in SCOPe 2.04
Species Human rhinovirus B 14 (HRV-14) [TaxId:12131] from b.121.4.1 Rhinovirus coat proteins appears in SCOPe 2.06
Species Human rhinovirus B 14 (HRV-14) [TaxId:12131] from b.121.4.1 Rhinovirus coat proteins appears in the current release, SCOPe 2.08