SCOPe 2.01: Species: Satellite tobacco necrosis virus [TaxId: 12881]

Lineage for Species: Satellite tobacco necrosis virus [TaxId: 12881]

Root: SCOPe 2.01
Class b: All beta proteins [48724] (174 folds)

Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies

Superfamily b.121.7: Satellite viruses [88650] (1 family)
Family b.121.7.1: Satellite viruses [88651] (2 proteins)
Protein STNV coat protein [49621] (1 species)
Species Satellite tobacco necrosis virus [TaxId:12881] [49622] (3 PDB entries)

PDB entries in Species: Satellite tobacco necrosis virus [TaxId: 12881]:

Domain(s) for 1a34:
- Domain d1a34a_: 1a34 A: [23286]
  protein/RNA complex; complexed with so4, u
Domain(s) for 2buk:
- Domain d2buka_: 2buk A: [129220]
  automated match to d2stv__
  complexed with ca
Domain(s) for 3rqv:
1. Domain d3rqva_: 3rqv A: [185099]
  automated match to d2buka1
  complexed with ca
2. Domain d3rqvb_: 3rqv B: [185100]
  automated match to d2buka1
  complexed with ca
3. Domain d3rqvc_: 3rqv C: [185101]
  automated match to d2buka1
  complexed with ca
4. Domain d3rqvd_: 3rqv D: [185102]
  automated match to d2buka1
  complexed with ca
5. Domain d3rqve_: 3rqv E: [185103]
  automated match to d2buka1
  complexed with ca
6. Domain d3rqvf_: 3rqv F: [185104]
  automated match to d2buka1
  complexed with ca
7. Domain d3rqvg_: 3rqv G: [185105]
  automated match to d2buka1
  complexed with ca
8. Domain d3rqvh_: 3rqv H: [185106]
  automated match to d2buka1
  complexed with ca
9. Domain d3rqvi_: 3rqv I: [185107]
  automated match to d2buka1
  complexed with ca
10. Domain d3rqvj_: 3rqv J: [185108]
  automated match to d2buka1
  complexed with ca
11. Domain d3rqvk_: 3rqv K: [185109]
  automated match to d2buka1
  complexed with ca
12. Domain d3rqvl_: 3rqv L: [185110]
  automated match to d2buka1
  complexed with ca
13. Domain d3rqvm_: 3rqv M: [185111]
  automated match to d2buka1
  complexed with ca
14. Domain d3rqvn_: 3rqv N: [185112]
  automated match to d2buka1
  complexed with ca
15. Domain d3rqvo_: 3rqv O: [185113]
  automated match to d2buka1
  complexed with ca
16. Domain d3rqvp_: 3rqv P: [185114]
  automated match to d2buka1
  complexed with ca
17. Domain d3rqvq_: 3rqv Q: [185115]
  automated match to d2buka1
  complexed with ca
18. Domain d3rqvr_: 3rqv R: [185116]
  automated match to d2buka1
  complexed with ca
19. Domain d3rqvs_: 3rqv S: [185117]
  automated match to d2buka1
  complexed with ca
20. Domain d3rqvt_: 3rqv T: [185118]
  automated match to d2buka1
  complexed with ca
21. Domain d3rqvu_: 3rqv U: [185119]
  automated match to d2buka1
  complexed with ca
22. Domain d3rqvv_: 3rqv V: [185120]
  automated match to d2buka1
  complexed with ca
23. Domain d3rqvw_: 3rqv W: [185121]
  automated match to d2buka1
  complexed with ca
24. Domain d3rqvx_: 3rqv X: [185122]
  automated match to d2buka1
  complexed with ca
25. Domain d3rqvy_: 3rqv Y: [185123]
  automated match to d2buka1
  complexed with ca
26. Domain d3rqvz_: 3rqv Z: [185124]
  automated match to d2buka1
  complexed with ca

More info for Species Satellite tobacco necrosis virus [TaxId:12881] from b.121.7.1 STNV coat protein

Timeline for Species Satellite tobacco necrosis virus [TaxId:12881] from b.121.7.1 STNV coat protein:

Species Satellite tobacco necrosis virus [TaxId:12881] from b.121.7.1 STNV coat protein first appeared (with stable ids) in SCOP 1.55, called Species Satellite tobacco necrosis virus [TaxId:12881] from b.10.1.2 STNV coat protein
Species Satellite tobacco necrosis virus [TaxId:12881] from b.121.7.1 STNV coat protein appears in SCOP 1.75
Species Satellite tobacco necrosis virus [TaxId:12881] from b.121.7.1 STNV coat protein appears in SCOPe 2.02
Species Satellite tobacco necrosis virus [TaxId:12881] from b.121.7.1 STNV coat protein appears in the current release, SCOPe 2.08