Lineage for Protein: Synaptogamin I

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2038038Fold b.7: C2 domain-like [49561] (5 superfamilies)
    sandwich; 8 strands in 2 sheets; greek-key
  4. 2038039Superfamily b.7.1: C2 domain (Calcium/lipid-binding domain, CaLB) [49562] (3 families) (S)
    two constituent families are related by circular permutation
  5. 2038183Family b.7.1.2: Synaptotagmin-like (S variant) [49575] (11 protein domains)
    topologically similar to the C-terminal domain of PapD
  6. 2038208Protein Synaptogamin I [49576] (3 species)
    duplication: contains tandem repeat of two similar domains

Species:

  1. 2038209Human (Homo sapiens) [TaxId:9606] [158946] (10 PDB entries)
    1. Domain for 2k45:
    2. Domain for 2k4a:
    3. Domains for 2k8m:
      1. 2038218Domain d2k8ma1: 2k8m A:3-128 [242415]
        Other proteins in same PDB: d2k8ma2, d2k8mb_, d2k8mc_, d2k8md2
        automated match to d1byna_
      2. 2038219Domain d2k8md1: 2k8m D:3-128 [242418]
        Other proteins in same PDB: d2k8ma2, d2k8mb_, d2k8mc_, d2k8md2
        automated match to d1byna_
    4. Domains for 2ki6:
      1. 2038222Domain d2ki6a_: 2ki6 A: [242524]
        Other proteins in same PDB: d2ki6b_, d2ki6c_, d2ki6d_, d2ki6e_
        automated match to d1byna_
      2. 2038223Domain d2ki6f_: 2ki6 F: [242529]
        Other proteins in same PDB: d2ki6b_, d2ki6c_, d2ki6d_, d2ki6e_
        automated match to d1byna_
    5. Domain for 2lha:
    6. Domains for 2r83:
      1. 2038214Domain d2r83a1: 2r83 A:268-418 [151670]
        automated match to d1dqva2
        complexed with cl
      2. 2038215Domain d2r83a2: 2r83 A:140-267 [238850]
        automated match to d1dqva1
        complexed with cl
      3. 2038216Domain d2r83b1: 2r83 B:268-418 [151671]
        automated match to d1dqva2
        complexed with cl
      4. 2038217Domain d2r83b2: 2r83 B:140-267 [238851]
        automated match to d1dqva1
        complexed with cl
    7. Domain for 3f00:
    8. Domain for 3f01:
    9. Domain for 3f04:
    10. Domain for 3f05:
  2. 2038225Norway rat (Rattus norvegicus) [TaxId:10116] [49577] (9 PDB entries)
    Uniprot P21707 271-419 ! Uniprot P21707 271-419
    1. Domain for 1byn:
    2. Domain for 1k5w:
    3. Domain for 1rsy:
    4. Domain for 1tjm:
    5. Domain for 1tjx:
    6. Domain for 1uov:
    7. Domain for 1uow:
    8. Domains for 5w5c:
      1. 2295092Domain d5w5cf1: 5w5c F:143-267 [338393]
        Other proteins in same PDB: d5w5cb_, d5w5cc_, d5w5cd_
        automated match to d2r83a2
        complexed with gol, mg
      2. 2295093Domain d5w5cf2: 5w5c F:268-418 [338394]
        Other proteins in same PDB: d5w5cb_, d5w5cc_, d5w5cd_
        automated match to d2r83a1
        complexed with gol, mg
    9. Domain for 5w5d:
  3. 2292135Mus musculus [TaxId:10090] [335436] (1 PDB entry)

More info for Protein Synaptogamin I from b.7.1.2: Synaptotagmin-like (S variant)

Timeline for Protein Synaptogamin I from b.7.1.2: Synaptotagmin-like (S variant):