SCOP 1.75: Protein: Cu,Zn superoxide dismutase, SOD

Lineage for Protein: Cu,Zn superoxide dismutase, SOD

Root: SCOP 1.75
Class b: All beta proteins [48724] (174 folds)
Fold b.1: Immunoglobulin-like beta-sandwich [48725] (28 superfamilies)
sandwich; 7 strands in 2 sheets; greek-key
some members of the fold have additional strands
Superfamily b.1.8: Cu,Zn superoxide dismutase-like [49329] (1 family)
has additional strand at N-terminus
Family b.1.8.1: Cu,Zn superoxide dismutase-like [49330] (2 proteins)
Protein Cu,Zn superoxide dismutase, SOD [49331] (11 species)

Species:

Actinobacillus pleuropneumoniae [TaxId:715] [49340] (1 PDB entry)
- Domains for 2aps:
  1. Domain d2apsa_: 2aps A: [22298]
  2. Domain d2apsb_: 2aps B: [22299]
    complexed with cu, zn; mutant
African clawed frog (Xenopus laevis) [TaxId:8355] [49334] (1 PDB entry)
- Domains for 1xso:
  1. Domain d1xsoa_: 1xso A: [22273]
  2. Domain d1xsob_: 1xso B: [22274]
    complexed with cu, zn; mutant
Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [49336] (12 PDB entries)
1. Domain for 1b4l:
  - Domain d1b4la_: 1b4l A: [22282]
2. Domain for 1b4t:
  - Domain d1b4ta_: 1b4t A: [22283]
3. Domain for 1f18:
  - Domain d1f18a_: 1f18 A: [76150]
    complexed with cu, zn; mutant
4. Domain for 1f1a:
  - Domain d1f1aa_: 1f1a A: [76151]
    complexed with cu, zn; mutant
5. Domain for 1f1d:
  - Domain d1f1da_: 1f1d A: [76152]
    complexed with cu, zn; mutant
6. Domains for 1f1g:
  1. Domain d1f1ga_: 1f1g A: [76153]
  2. Domain d1f1gb_: 1f1g B: [76154]
  3. Domain d1f1gc_: 1f1g C: [76155]
  4. Domain d1f1gd_: 1f1g D: [76156]
  5. Domain d1f1ge_: 1f1g E: [76157]
  6. Domain d1f1gf_: 1f1g F: [76158]
    complexed with cu, po4, zn; mutant
7. Domain for 1jcv:
  - Domain d1jcva_: 1jcv A: [22279]
    complexed with cu, zn; mutant
8. Domains for 1jk9:
  1. Domain d1jk9a_: 1jk9 A: [63149]
    Other proteins in same PDB: d1jk9b1, d1jk9b2, d1jk9d1, d1jk9d2
    complexed with Yccs copper chaperone
  2. Domain d1jk9c_: 1jk9 C: [63152]
    Other proteins in same PDB: d1jk9b1, d1jk9b2, d1jk9d1, d1jk9d2
    complexed with Yccs copper chaperone
    complexed with so4, zn; mutant
9. Domains for 1sdy:
  1. Domain d1sdya_: 1sdy A: [22285]
  2. Domain d1sdyb_: 1sdy B: [22286]
  3. Domain d1sdyc_: 1sdy C: [22287]
  4. Domain d1sdyd_: 1sdy D: [22288]
    complexed with cu, zn; mutant
10. Domain for 1yaz:
  - Domain d1yaza_: 1yaz A: [22284]
11. Domain for 1yso:
  - Domain d1ysoa_: 1yso A: [22281]
    complexed with cu1, zn; mutant
12. Domain for 2jcw:
  - Domain d2jcwa_: 2jcw A: [22280]
    complexed with cu1, zn; mutant
Blood fluke (Schistosoma mansoni) [TaxId:6183] [110066] (2 PDB entries)
Uniprot Q01137
1. Domains for 1to4:
  1. Domain d1to4a_: 1to4 A: [107162]
  2. Domain d1to4b_: 1to4 B: [107163]
  3. Domain d1to4c_: 1to4 C: [107164]
  4. Domain d1to4d_: 1to4 D: [107165]
    complexed with cu, zn
2. Domains for 1to5:
  1. Domain d1to5a_: 1to5 A: [107166]
  2. Domain d1to5b_: 1to5 B: [107167]
  3. Domain d1to5c_: 1to5 C: [107168]
  4. Domain d1to5d_: 1to5 D: [107169]
    complexed with act, cu, zn
Cow (Bos taurus) [TaxId:9913] [49332] (21 PDB entries)
1. Domains for 1cb4:
  1. Domain d1cb4a_: 1cb4 A: [22236]
  2. Domain d1cb4b_: 1cb4 B: [22237]
    complexed with cu, zn; mutant
2. Domains for 1cbj:
  1. Domain d1cbja_: 1cbj A: [22213]
  2. Domain d1cbjb_: 1cbj B: [22214]
    complexed with cu, zn; mutant
3. Domains for 1cob:
  1. Domain d1coba_: 1cob A: [22233]
  2. Domain d1cobb_: 1cob B: [22234]
    complexed with co, cu; mutant
4. Domains for 1e9o:
  1. Domain d1e9oa_: 1e9o A: [22227]
  2. Domain d1e9ob_: 1e9o B: [22228]
    complexed with cu; mutant
5. Domains for 1e9p:
  1. Domain d1e9pa_: 1e9p A: [22215]
  2. Domain d1e9pb_: 1e9p B: [22216]
    complexed with cu, zn; mutant
6. Domains for 1e9q:
  1. Domain d1e9qa_: 1e9q A: [22217]
  2. Domain d1e9qb_: 1e9q B: [22218]
    complexed with cu, zn; mutant
7. Domains for 1q0e:
  1. Domain d1q0ea_: 1q0e A: [95504]
  2. Domain d1q0eb_: 1q0e B: [95505]
    complexed with ace, cu, zn
8. Domains for 1sda:
  1. Domain d1sdab_: 1sda B: [22238]
  2. Domain d1sdag_: 1sda G: [22239]
  3. Domain d1sdao_: 1sda O: [22240]
  4. Domain d1sday_: 1sda Y: [22241]
    complexed with cu, no2, zn; mutant
9. Domains for 1sxa:
  1. Domain d1sxaa_: 1sxa A: [22223]
  2. Domain d1sxab_: 1sxa B: [22224]
    complexed with cu, zn; mutant
10. Domains for 1sxb:
  1. Domain d1sxba_: 1sxb A: [22221]
  2. Domain d1sxbb_: 1sxb B: [22222]
    complexed with cu, zn; mutant
11. Domains for 1sxc:
  1. Domain d1sxca_: 1sxc A: [22219]
  2. Domain d1sxcb_: 1sxc B: [22220]
    complexed with cu, zn; mutant
12. Domains for 1sxn:
  1. Domain d1sxna_: 1sxn A: [22225]
  2. Domain d1sxnb_: 1sxn B: [22226]
    complexed with ca, cu, zn; mutant
13. Domains for 1sxs:
  1. Domain d1sxsa_: 1sxs A: [22231]
  2. Domain d1sxsb_: 1sxs B: [22232]
    complexed with ium, scn; mutant
14. Domains for 1sxz:
  1. Domain d1sxza_: 1sxz A: [22229]
  2. Domain d1sxzb_: 1sxz B: [22230]
    complexed with ium, nnn; mutant
15. Domains for 2aeo:
  1. Domain d2aeoa1: 2aeo A:1-151 [126637]
    automatically matched to d1cbja_
    complexed with cu, ncp, zn
  2. Domain d2aeob1: 2aeo B:1-151 [126638]
    automatically matched to d1cbja_
    complexed with cu, ncp, zn
16. Domains for 2sod:
  1. Domain d2sodb_: 2sod B: [22242]
  2. Domain d2sodg_: 2sod G: [22243]
  3. Domain d2sodo_: 2sod O: [22244]
  4. Domain d2sody_: 2sod Y: [22245]
    complexed with cu, zn; mutant
17. Domains for 2z7u:
  1. Domain d2z7ua1: 2z7u A:1-151 [154200]
    automatically matched to d1cbja_
    complexed with cu, zn
  2. Domain d2z7ub1: 2z7u B:1-151 [154201]
    automatically matched to d1cbja_
    complexed with cu, zn
18. Domains for 2z7w:
  1. Domain d2z7wa1: 2z7w A:1-151 [154202]
    automatically matched to d1cbja_
    complexed with cu, zn
  2. Domain d2z7wb1: 2z7w B:1-151 [154203]
    automatically matched to d1cbja_
    complexed with cu, zn
19. Domains for 2z7y:
  1. Domain d2z7ya1: 2z7y A:1-151 [154204]
    automatically matched to d1cbja_
    complexed with cu, zn
  2. Domain d2z7yb1: 2z7y B:1-151 [154205]
    automatically matched to d1cbja_
    complexed with cu, zn
20. Domains for 2z7z:
  1. Domain d2z7za1: 2z7z A:1-151 [154206]
    automatically matched to d1cbja_
    complexed with cu, zn
  2. Domain d2z7zb1: 2z7z B:1-151 [154207]
    automatically matched to d1cbja_
    complexed with cu, zn
21. Domains for 3sod:
  1. Domain d3sodb_: 3sod B: [118679]
  2. Domain d3sodg_: 3sod G: [118680]
  3. Domain d3sodo_: 3sod O: [22235]
    complexed with cu, zn; mutant
  4. Domain d3sody_: 3sod Y: [118681]
    complexed with cu, zn; mutant
Escherichia coli [TaxId:562] [49338] (1 PDB entry)
Monomeric enzyme
- Domain for 1eso:
  - Domain d1esoa_: 1eso A: [22293]
    complexed with cu, zn; mutant
Human (Homo sapiens) [TaxId:9606] [49333] (27 PDB entries)
1. Domains for 1azv:
  1. Domain d1azva_: 1azv A: [22247]
  2. Domain d1azvb_: 1azv B: [22248]
    complexed with cu, zn; mutant
2. Domain for 1ba9:
  - Domain d1ba9a_: 1ba9 A: [22272]
    monomeric mutant
3. Domain for 1dsw:
  - Domain d1dswa_: 1dsw A: [22271]
    monomeric mutant
4. Domains for 1fun:
  1. Domain d1funa_: 1fun A: [22259]
  2. Domain d1funb_: 1fun B: [22260]
  3. Domain d1func_: 1fun C: [22261]
  4. Domain d1fund_: 1fun D: [22262]
  5. Domain d1fune_: 1fun E: [22263]
  6. Domain d1funf_: 1fun F: [22264]
  7. Domain d1fung_: 1fun G: [22265]
  8. Domain d1funh_: 1fun H: [22266]
  9. Domain d1funi_: 1fun I: [22267]
  10. Domain d1funj_: 1fun J: [22268]
    complexed with cu, so4, zn; mutant
5. Domains for 1hl4:
  1. Domain d1hl4a_: 1hl4 A: [83587]
  2. Domain d1hl4b_: 1hl4 B: [83588]
  3. Domain d1hl4c_: 1hl4 C: [83589]
  4. Domain d1hl4d_: 1hl4 D: [83590]
    complexed with ace, zn; mutant
6. Domains for 1hl5:
  1. Domain d1hl5a_: 1hl5 A: [83591]
  2. Domain d1hl5b_: 1hl5 B: [83592]
  3. Domain d1hl5c_: 1hl5 C: [83593]
  4. Domain d1hl5d_: 1hl5 D: [83594]
  5. Domain d1hl5e_: 1hl5 E: [83595]
  6. Domain d1hl5f_: 1hl5 F: [83596]
  7. Domain d1hl5g_: 1hl5 G: [83597]
  8. Domain d1hl5h_: 1hl5 H: [83598]
  9. Domain d1hl5i_: 1hl5 I: [83599]
  10. Domain d1hl5j_: 1hl5 J: [83600]
  11. Domain d1hl5k_: 1hl5 K: [83601]
  12. Domain d1hl5l_: 1hl5 L: [83602]
  13. Domain d1hl5m_: 1hl5 M: [83603]
  14. Domain d1hl5n_: 1hl5 N: [83604]
  15. Domain d1hl5o_: 1hl5 O: [83605]
  16. Domain d1hl5p_: 1hl5 P: [83606]
  17. Domain d1hl5q_: 1hl5 Q: [83607]
  18. Domain d1hl5s_: 1hl5 S: [83608]
    complexed with ca, cu, zn; mutant
7. Domain for 1kmg:
  - Domain d1kmga_: 1kmg A: [77441]
    monomeric copper-free mutant
8. Domains for 1l3n:
  1. Domain d1l3na_: 1l3n A: [73549]
  2. Domain d1l3nb_: 1l3n B: [73550]
    complexed with cu1, zn; mutant
9. Domain for 1mfm:
  - Domain d1mfma_: 1mfm A: [22246]
    monomeric mutant
10. Domains for 1n18:
  1. Domain d1n18a_: 1n18 A: [79785]
    thermostable mutant
  2. Domain d1n18b_: 1n18 B: [79786]
    thermostable mutant
  3. Domain d1n18c_: 1n18 C: [79787]
    thermostable mutant
  4. Domain d1n18d_: 1n18 D: [79788]
    thermostable mutant
  5. Domain d1n18e_: 1n18 E: [79789]
    thermostable mutant
  6. Domain d1n18f_: 1n18 F: [79790]
    thermostable mutant
  7. Domain d1n18g_: 1n18 G: [79791]
    thermostable mutant
  8. Domain d1n18h_: 1n18 H: [79792]
    thermostable mutant
  9. Domain d1n18i_: 1n18 I: [79793]
    thermostable mutant
  10. Domain d1n18j_: 1n18 J: [79794]
    thermostable mutant
11. Domains for 1n19:
  1. Domain d1n19a_: 1n19 A: [79795]
  2. Domain d1n19b_: 1n19 B: [79796]
    complexed with cu1, so4, zn; mutant
12. Domains for 1oez:
  1. Domain d1oezw_: 1oez W: [86926]
  2. Domain d1oezx_: 1oez X: [86927]
  3. Domain d1oezy_: 1oez Y: [86928]
  4. Domain d1oezz_: 1oez Z: [86929]
    complexed with so4, zn; mutant
13. Domains for 1ozt:
  1. Domain d1oztg_: 1ozt G: [87622]
  2. Domain d1ozth_: 1ozt H: [87623]
  3. Domain d1ozti_: 1ozt I: [87624]
  4. Domain d1oztj_: 1ozt J: [87625]
  5. Domain d1oztk_: 1ozt K: [87626]
  6. Domain d1oztl_: 1ozt L: [87627]
  7. Domain d1oztm_: 1ozt M: [87628]
  8. Domain d1oztn_: 1ozt N: [87629]
    mutant
14. Domains for 1ozu:
  1. Domain d1ozua_: 1ozu A: [87630]
  2. Domain d1ozub_: 1ozu B: [87631]
    complexed with csx, so4, zn; mutant
15. Domains for 1p1v:
  1. Domain d1p1va_: 1p1v A: [93900]
  2. Domain d1p1vb_: 1p1v B: [93901]
  3. Domain d1p1vc_: 1p1v C: [93902]
    complexed with so4, zn; mutant
16. Domains for 1ptz:
  1. Domain d1ptza_: 1ptz A: [95110]
  2. Domain d1ptzb_: 1ptz B: [95111]
    complexed with cu1, so4, zn; mutant
17. Domains for 1pu0:
  1. Domain d1pu0a_: 1pu0 A: [95112]
  2. Domain d1pu0b_: 1pu0 B: [95113]
  3. Domain d1pu0c_: 1pu0 C: [95114]
  4. Domain d1pu0d_: 1pu0 D: [95115]
  5. Domain d1pu0e_: 1pu0 E: [95116]
  6. Domain d1pu0f_: 1pu0 F: [95117]
  7. Domain d1pu0g_: 1pu0 G: [95118]
  8. Domain d1pu0h_: 1pu0 H: [95119]
  9. Domain d1pu0i_: 1pu0 I: [95120]
  10. Domain d1pu0j_: 1pu0 J: [95121]
    complexed with cu1, so4, zn
18. Domain for 1rk7:
  - Domain d1rk7a_: 1rk7 A: [97602]
    mutant
19. Domains for 1sos:
  1. Domain d1sosa_: 1sos A: [22249]
  2. Domain d1sosb_: 1sos B: [22250]
  3. Domain d1sosc_: 1sos C: [22251]
  4. Domain d1sosd_: 1sos D: [22252]
  5. Domain d1sose_: 1sos E: [22253]
  6. Domain d1sosf_: 1sos F: [22254]
  7. Domain d1sosg_: 1sos G: [22255]
  8. Domain d1sosh_: 1sos H: [22256]
  9. Domain d1sosi_: 1sos I: [22257]
  10. Domain d1sosj_: 1sos J: [22258]
    complexed with cu, so4, zn; mutant
20. Domains for 1spd:
  1. Domain d1spda_: 1spd A: [22269]
  2. Domain d1spdb_: 1spd B: [22270]
    complexed with cu, zn; mutant
21. Domains for 1uxl:
  1. Domain d1uxla_: 1uxl A: [100147]
  2. Domain d1uxlb_: 1uxl B: [100148]
  3. Domain d1uxlc_: 1uxl C: [100149]
  4. Domain d1uxld_: 1uxl D: [100150]
  5. Domain d1uxle_: 1uxl E: [100151]
  6. Domain d1uxlf_: 1uxl F: [100152]
  7. Domain d1uxlg_: 1uxl G: [100153]
  8. Domain d1uxlh_: 1uxl H: [100154]
  9. Domain d1uxli_: 1uxl I: [100155]
  10. Domain d1uxlj_: 1uxl J: [100156]
    complexed with cu, so4, zn; mutant
22. Domains for 1uxm:
  1. Domain d1uxma_: 1uxm A: [100157]
  2. Domain d1uxmb_: 1uxm B: [100158]
  3. Domain d1uxmc_: 1uxm C: [100159]
  4. Domain d1uxmd_: 1uxm D: [100160]
  5. Domain d1uxme_: 1uxm E: [100161]
  6. Domain d1uxmf_: 1uxm F: [100162]
  7. Domain d1uxmg_: 1uxm G: [100163]
  8. Domain d1uxmh_: 1uxm H: [100164]
  9. Domain d1uxmi_: 1uxm I: [100165]
  10. Domain d1uxmj_: 1uxm J: [100166]
  11. Domain d1uxmk_: 1uxm K: [100167]
  12. Domain d1uxml_: 1uxm L: [100168]
    complexed with cu, zn; mutant
23. Domains for 2af2:
  1. Domain d2af2a1: 2af2 A:1-153 [126652]
    automatically matched to d1l3na_
    complexed with zn; mutant
  2. Domain d2af2b1: 2af2 B:1-153 [126653]
    automatically matched to d1l3na_
    complexed with zn; mutant
24. Domains for 2c9s:
  1. Domain d2c9sa1: 2c9s A:1-153 [130139]
    automatically matched to d1hl4a_
    complexed with act, so4, zn
  2. Domain d2c9sf1: 2c9s F:1-153 [130140]
    automatically matched to d1hl4a_
    complexed with act, so4, zn
25. Domains for 2c9u:
  1. Domain d2c9ua1: 2c9u A:1-153 [130141]
    automatically matched to d1hl4a_
    complexed with act, cu, so4, zn
  2. Domain d2c9uf1: 2c9u F:1-153 [130142]
    automatically matched to d1hl4a_
    complexed with act, cu, so4, zn
26. Domains for 2c9v:
  1. Domain d2c9va1: 2c9v A:1-153 [130143]
    automatically matched to d1hl4a_
    complexed with cu, na, so4, zn
  2. Domain d2c9vf1: 2c9v F:1-153 [130144]
    automatically matched to d1hl4a_
    complexed with cu, na, so4, zn
27. Domains for 2v0a:
  1. Domain d2v0aa1: 2v0a A:1-153 [140048]
    automatically matched to d1hl4a_
    complexed with act, cu, so4, zn
  2. Domain d2v0af1: 2v0a F:1-153 [140049]
    automatically matched to d1hl4a_
    complexed with act, cu, so4, zn
Mycobacterium tuberculosis [TaxId:1773] [110065] (1 PDB entry)
Uniprot P96278
- Domain for 1pzs:
  - Domain d1pzsa_: 1pzs A: [104397]
    complexed with cu
Photobacterium leiognathi [TaxId:553611] [49337] (9 PDB entries)
1. Domain for 1bzo:
  - Domain d1bzoa_: 1bzo A: [22292]
    complexed with cu, ium, zn; mutant
2. Domain for 1ib5:
  - Domain d1ib5a_: 1ib5 A: [62145]
    complexed with cu, zn; mutant
3. Domain for 1ibb:
  - Domain d1ibba_: 1ibb A: [62156]
    complexed with cu, zn; mutant
4. Domain for 1ibd:
  - Domain d1ibda_: 1ibd A: [62157]
    complexed with cu, zn; mutant
5. Domain for 1ibf:
  - Domain d1ibfa_: 1ibf A: [62158]
    complexed with cu, zn; mutant
6. Domain for 1ibh:
  - Domain d1ibha_: 1ibh A: [62159]
    complexed with cu, zn; mutant
7. Domain for 1oaj:
  - Domain d1oaja_: 1oaj A: [86738]
    complexed with cu, zn; mutant
8. Domain for 1oal:
  - Domain d1oala_: 1oal A: [86739]
    complexed with cu, zn; mutant
9. Domains for 1yai:
  1. Domain d1yaia_: 1yai A: [22289]
  2. Domain d1yaib_: 1yai B: [22290]
  3. Domain d1yaic_: 1yai C: [22291]
    complexed with cu, zn; mutant
Salmonella typhimurium [TaxId:90371] [49339] (1 PDB entry)
- Domains for 1eqw:
  1. Domain d1eqwa_: 1eqw A: [22294]
  2. Domain d1eqwb_: 1eqw B: [22295]
  3. Domain d1eqwc_: 1eqw C: [22296]
  4. Domain d1eqwd_: 1eqw D: [22297]
    complexed with cu, zn; mutant
Spinach (Spinacia oleracea) [TaxId:3562] [49335] (1 PDB entry)
- Domains for 1srd:
  1. Domain d1srda_: 1srd A: [22275]
  2. Domain d1srdb_: 1srd B: [22276]
  3. Domain d1srdc_: 1srd C: [22277]
  4. Domain d1srdd_: 1srd D: [22278]
    complexed with cu, zn; mutant

More info for Protein Cu,Zn superoxide dismutase, SOD from b.1.8.1: Cu,Zn superoxide dismutase-like

Timeline for Protein Cu,Zn superoxide dismutase, SOD from b.1.8.1: Cu,Zn superoxide dismutase-like:

Protein Cu,Zn superoxide dismutase, SOD from b.1.8.1: Cu,Zn superoxide dismutase-like first appeared (with stable ids) in SCOP 1.55
Protein Cu,Zn superoxide dismutase, SOD from b.1.8.1: Cu,Zn superoxide dismutase-like appears in SCOP 1.73
Protein Cu,Zn superoxide dismutase, SOD from b.1.8.1: Cu,Zn superoxide dismutase-like appears in SCOPe 2.01
Protein Cu,Zn superoxide dismutase, SOD from b.1.8.1: Cu,Zn superoxide dismutase-like appears in the current release, SCOPe 2.08