SCOP 1.65: Protein: Cu,Zn superoxide dismutase, SOD

Lineage for Protein: Cu,Zn superoxide dismutase, SOD

Root: SCOP 1.65
Class b: All beta proteins [48724] (126 folds)
Fold b.1: Immunoglobulin-like beta-sandwich [48725] (20 superfamilies)
sandwich; 7 strands in 2 sheets; greek-key
some members of the fold have additional strands
Superfamily b.1.8: Cu,Zn superoxide dismutase-like [49329] (1 family)
has additional strand at N-terminus
Family b.1.8.1: Cu,Zn superoxide dismutase-like [49330] (2 proteins)
Protein Cu,Zn superoxide dismutase, SOD [49331] (9 species)

Species:

Actinobacillus pleuropneumoniae [TaxId:715] [49340] (1 PDB entry)
- Domains for 2aps:
  1. Domain d2apsa_: 2aps A: [22298]
  2. Domain d2apsb_: 2aps B: [22299]
    complexed with cu, zn; mutant
African clawed frog (Xenopus laevis) [TaxId:8355] [49334] (1 PDB entry)
- Domains for 1xso:
  1. Domain d1xsoa_: 1xso A: [22273]
  2. Domain d1xsob_: 1xso B: [22274]
    complexed with cu, zn; mutant
Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [49336] (12 PDB entries)
1. Domain for 1b4l:
  - Domain d1b4la_: 1b4l A: [22282]
2. Domain for 1b4t:
  - Domain d1b4ta_: 1b4t A: [22283]
3. Domain for 1f18:
  - Domain d1f18a_: 1f18 A: [76150]
    complexed with cu, zn; mutant
4. Domain for 1f1a:
  - Domain d1f1aa_: 1f1a A: [76151]
    complexed with cu, zn; mutant
5. Domain for 1f1d:
  - Domain d1f1da_: 1f1d A: [76152]
    complexed with cu, zn; mutant
6. Domains for 1f1g:
  1. Domain d1f1ga_: 1f1g A: [76153]
  2. Domain d1f1gb_: 1f1g B: [76154]
  3. Domain d1f1gc_: 1f1g C: [76155]
  4. Domain d1f1gd_: 1f1g D: [76156]
  5. Domain d1f1ge_: 1f1g E: [76157]
  6. Domain d1f1gf_: 1f1g F: [76158]
    complexed with cu, po4, zn; mutant
7. Domain for 1jcv:
  - Domain d1jcv__: 1jcv - [22279]
    complexed with cu, zn; mutant
8. Domains for 1jk9:
  1. Domain d1jk9a_: 1jk9 A: [63149]
    Other proteins in same PDB: d1jk9b1, d1jk9b2, d1jk9d1, d1jk9d2
  2. Domain d1jk9c_: 1jk9 C: [63152]
    Other proteins in same PDB: d1jk9b1, d1jk9b2, d1jk9d1, d1jk9d2
    complexed with Yccs copper chaperone
    complexed with so4, zn; mutant
9. Domains for 1sdy:
  1. Domain d1sdya_: 1sdy A: [22285]
  2. Domain d1sdyb_: 1sdy B: [22286]
  3. Domain d1sdyc_: 1sdy C: [22287]
  4. Domain d1sdyd_: 1sdy D: [22288]
    complexed with cu, zn; mutant
10. Domain for 1yaz:
  - Domain d1yaza_: 1yaz A: [22284]
11. Domain for 1yso:
  - Domain d1yso__: 1yso - [22281]
    complexed with cu1, zn; mutant
12. Domain for 2jcw:
  - Domain d2jcw__: 2jcw - [22280]
    complexed with cu1, zn; mutant
Cow (Bos taurus) [TaxId:9913] [49332] (15 PDB entries)
1. Domains for 1cb4:
  1. Domain d1cb4a_: 1cb4 A: [22236]
  2. Domain d1cb4b_: 1cb4 B: [22237]
    complexed with cu, zn; mutant
2. Domains for 1cbj:
  1. Domain d1cbja_: 1cbj A: [22213]
  2. Domain d1cbjb_: 1cbj B: [22214]
    complexed with cu, zn; mutant
3. Domains for 1cob:
  1. Domain d1coba_: 1cob A: [22233]
  2. Domain d1cobb_: 1cob B: [22234]
    complexed with co, cu; mutant
4. Domains for 1e9o:
  1. Domain d1e9oa_: 1e9o A: [22227]
  2. Domain d1e9ob_: 1e9o B: [22228]
    complexed with cu; mutant
5. Domains for 1e9p:
  1. Domain d1e9pa_: 1e9p A: [22215]
  2. Domain d1e9pb_: 1e9p B: [22216]
    complexed with cu, zn; mutant
6. Domains for 1e9q:
  1. Domain d1e9qa_: 1e9q A: [22217]
  2. Domain d1e9qb_: 1e9q B: [22218]
    complexed with cu, zn; mutant
7. Domains for 1sda:
  1. Domain d1sdab_: 1sda B: [22238]
  2. Domain d1sdag_: 1sda G: [22239]
  3. Domain d1sdao_: 1sda O: [22240]
  4. Domain d1sday_: 1sda Y: [22241]
    complexed with cu, no2, zn; mutant
8. Domains for 1sxa:
  1. Domain d1sxaa_: 1sxa A: [22223]
  2. Domain d1sxab_: 1sxa B: [22224]
    complexed with cu, zn; mutant
9. Domains for 1sxb:
  1. Domain d1sxba_: 1sxb A: [22221]
  2. Domain d1sxbb_: 1sxb B: [22222]
    complexed with cu, zn; mutant
10. Domains for 1sxc:
  1. Domain d1sxca_: 1sxc A: [22219]
  2. Domain d1sxcb_: 1sxc B: [22220]
    complexed with cu, zn; mutant
11. Domains for 1sxn:
  1. Domain d1sxna_: 1sxn A: [22225]
  2. Domain d1sxnb_: 1sxn B: [22226]
    complexed with ca, cu, zn; mutant
12. Domains for 1sxs:
  1. Domain d1sxsa_: 1sxs A: [22231]
  2. Domain d1sxsb_: 1sxs B: [22232]
    complexed with ium, scn; mutant
13. Domains for 1sxz:
  1. Domain d1sxza_: 1sxz A: [22229]
  2. Domain d1sxzb_: 1sxz B: [22230]
    complexed with ium, nnn; mutant
14. Domains for 2sod:
  1. Domain d2sodb_: 2sod B: [22242]
  2. Domain d2sodg_: 2sod G: [22243]
  3. Domain d2sodo_: 2sod O: [22244]
  4. Domain d2sody_: 2sod Y: [22245]
    complexed with cu, zn; mutant
15. Domain for 3sod:
  - Domain d3sodo_: 3sod O: [22235]
    complexed with cu, zn; mutant
Escherichia coli [TaxId:562] [49338] (1 PDB entry)
Monomeric enzyme
- Domain for 1eso:
  - Domain d1eso__: 1eso - [22293]
    complexed with cu, zn; mutant
Human (Homo sapiens) [TaxId:9606] [49333] (16 PDB entries)
1. Domains for 1azv:
  1. Domain d1azva_: 1azv A: [22247]
  2. Domain d1azvb_: 1azv B: [22248]
    complexed with cu, zn; mutant
2. Domain for 1ba9:
  - Domain d1ba9__: 1ba9 - [22272]
    monomeric mutant
3. Domain for 1dsw:
  - Domain d1dswa_: 1dsw A: [22271]
    monomeric mutant
4. Domains for 1fun:
  1. Domain d1funa_: 1fun A: [22259]
  2. Domain d1funb_: 1fun B: [22260]
  3. Domain d1func_: 1fun C: [22261]
  4. Domain d1fund_: 1fun D: [22262]
  5. Domain d1fune_: 1fun E: [22263]
  6. Domain d1funf_: 1fun F: [22264]
  7. Domain d1fung_: 1fun G: [22265]
  8. Domain d1funh_: 1fun H: [22266]
  9. Domain d1funi_: 1fun I: [22267]
  10. Domain d1funj_: 1fun J: [22268]
    complexed with cu, so4, zn; mutant
5. Domains for 1hl4:
  1. Domain d1hl4a_: 1hl4 A: [83587]
  2. Domain d1hl4b_: 1hl4 B: [83588]
  3. Domain d1hl4c_: 1hl4 C: [83589]
  4. Domain d1hl4d_: 1hl4 D: [83590]
    complexed with ace, zn; mutant
6. Domains for 1hl5:
  1. Domain d1hl5a_: 1hl5 A: [83591]
  2. Domain d1hl5b_: 1hl5 B: [83592]
  3. Domain d1hl5c_: 1hl5 C: [83593]
  4. Domain d1hl5d_: 1hl5 D: [83594]
  5. Domain d1hl5e_: 1hl5 E: [83595]
  6. Domain d1hl5f_: 1hl5 F: [83596]
  7. Domain d1hl5g_: 1hl5 G: [83597]
  8. Domain d1hl5h_: 1hl5 H: [83598]
  9. Domain d1hl5i_: 1hl5 I: [83599]
  10. Domain d1hl5j_: 1hl5 J: [83600]
  11. Domain d1hl5k_: 1hl5 K: [83601]
  12. Domain d1hl5l_: 1hl5 L: [83602]
  13. Domain d1hl5m_: 1hl5 M: [83603]
  14. Domain d1hl5n_: 1hl5 N: [83604]
  15. Domain d1hl5o_: 1hl5 O: [83605]
  16. Domain d1hl5p_: 1hl5 P: [83606]
  17. Domain d1hl5q_: 1hl5 Q: [83607]
  18. Domain d1hl5s_: 1hl5 S: [83608]
    complexed with ca, cu, zn; mutant
7. Domain for 1kmg:
  - Domain d1kmga_: 1kmg A: [77441]
    monomeric copper-free mutant
8. Domains for 1l3n:
  1. Domain d1l3na_: 1l3n A: [73549]
  2. Domain d1l3nb_: 1l3n B: [73550]
    complexed with cu1, zn; mutant
9. Domain for 1mfm:
  - Domain d1mfma_: 1mfm A: [22246]
    monomeric mutant
10. Domains for 1n18:
  1. Domain d1n18a_: 1n18 A: [79785]
  2. Domain d1n18b_: 1n18 B: [79786]
  3. Domain d1n18c_: 1n18 C: [79787]
  4. Domain d1n18d_: 1n18 D: [79788]
  5. Domain d1n18e_: 1n18 E: [79789]
  6. Domain d1n18f_: 1n18 F: [79790]
  7. Domain d1n18g_: 1n18 G: [79791]
  8. Domain d1n18h_: 1n18 H: [79792]
  9. Domain d1n18i_: 1n18 I: [79793]
  10. Domain d1n18j_: 1n18 J: [79794]
    thermostable mutant
11. Domains for 1n19:
  1. Domain d1n19a_: 1n19 A: [79795]
  2. Domain d1n19b_: 1n19 B: [79796]
    complexed with cu1, so4, zn; mutant
12. Domains for 1oez:
  1. Domain d1oezw_: 1oez W: [86926]
  2. Domain d1oezx_: 1oez X: [86927]
  3. Domain d1oezy_: 1oez Y: [86928]
  4. Domain d1oezz_: 1oez Z: [86929]
    complexed with so4, zn; mutant
13. Domains for 1ozt:
  1. Domain d1oztg_: 1ozt G: [87622]
  2. Domain d1ozth_: 1ozt H: [87623]
  3. Domain d1ozti_: 1ozt I: [87624]
  4. Domain d1oztj_: 1ozt J: [87625]
  5. Domain d1oztk_: 1ozt K: [87626]
  6. Domain d1oztl_: 1ozt L: [87627]
  7. Domain d1oztm_: 1ozt M: [87628]
  8. Domain d1oztn_: 1ozt N: [87629]
    mutant
14. Domains for 1ozu:
  1. Domain d1ozua_: 1ozu A: [87630]
  2. Domain d1ozub_: 1ozu B: [87631]
    complexed with csx, so4, zn; mutant
15. Domains for 1sos:
  1. Domain d1sosa_: 1sos A: [22249]
  2. Domain d1sosb_: 1sos B: [22250]
  3. Domain d1sosc_: 1sos C: [22251]
  4. Domain d1sosd_: 1sos D: [22252]
  5. Domain d1sose_: 1sos E: [22253]
  6. Domain d1sosf_: 1sos F: [22254]
  7. Domain d1sosg_: 1sos G: [22255]
  8. Domain d1sosh_: 1sos H: [22256]
  9. Domain d1sosi_: 1sos I: [22257]
  10. Domain d1sosj_: 1sos J: [22258]
    complexed with cu, so4, zn; mutant
16. Domains for 1spd:
  1. Domain d1spda_: 1spd A: [22269]
  2. Domain d1spdb_: 1spd B: [22270]
    complexed with cu, zn; mutant
Photobacterium leiognathi [49337] (9 PDB entries)
1. Domain for 1bzo:
  - Domain d1bzoa_: 1bzo A: [22292]
    complexed with cu, ium, zn; mutant
2. Domain for 1ib5:
  - Domain d1ib5a_: 1ib5 A: [62145]
    complexed with cu, zn; mutant
3. Domain for 1ibb:
  - Domain d1ibba_: 1ibb A: [62156]
    complexed with cu, zn; mutant
4. Domain for 1ibd:
  - Domain d1ibda_: 1ibd A: [62157]
    complexed with cu, zn; mutant
5. Domain for 1ibf:
  - Domain d1ibfa_: 1ibf A: [62158]
    complexed with cu, zn; mutant
6. Domain for 1ibh:
  - Domain d1ibha_: 1ibh A: [62159]
    complexed with cu, zn; mutant
7. Domain for 1oaj:
  - Domain d1oaja_: 1oaj A: [86738]
    complexed with cu, zn; mutant
8. Domain for 1oal:
  - Domain d1oala_: 1oal A: [86739]
    complexed with cu, zn; mutant
9. Domains for 1yai:
  1. Domain d1yaia_: 1yai A: [22289]
  2. Domain d1yaib_: 1yai B: [22290]
  3. Domain d1yaic_: 1yai C: [22291]
    complexed with cu, zn; mutant
Salmonella typhimurium [TaxId:90371] [49339] (1 PDB entry)
- Domains for 1eqw:
  1. Domain d1eqwa_: 1eqw A: [22294]
  2. Domain d1eqwb_: 1eqw B: [22295]
  3. Domain d1eqwc_: 1eqw C: [22296]
  4. Domain d1eqwd_: 1eqw D: [22297]
    complexed with cu, zn; mutant
Spinach (Spinacia oleracea) [TaxId:3562] [49335] (1 PDB entry)
- Domains for 1srd:
  1. Domain d1srda_: 1srd A: [22275]
  2. Domain d1srdb_: 1srd B: [22276]
  3. Domain d1srdc_: 1srd C: [22277]
  4. Domain d1srdd_: 1srd D: [22278]
    complexed with cu, zn; mutant

More info for Protein Cu,Zn superoxide dismutase, SOD from b.1.8.1: Cu,Zn superoxide dismutase-like

Timeline for Protein Cu,Zn superoxide dismutase, SOD from b.1.8.1: Cu,Zn superoxide dismutase-like:

Protein Cu,Zn superoxide dismutase, SOD from b.1.8.1: Cu,Zn superoxide dismutase-like first appeared (with stable ids) in SCOP 1.55
Protein Cu,Zn superoxide dismutase, SOD from b.1.8.1: Cu,Zn superoxide dismutase-like appears in SCOP 1.63
Protein Cu,Zn superoxide dismutase, SOD from b.1.8.1: Cu,Zn superoxide dismutase-like appears in SCOP 1.67
Protein Cu,Zn superoxide dismutase, SOD from b.1.8.1: Cu,Zn superoxide dismutase-like appears in the current release, SCOPe 2.08