Lineage for Protein: Cu,Zn superoxide dismutase, SOD

  1. Root: SCOP 1.63
  2. 218896Class b: All beta proteins [48724] (119 folds)
  3. 218897Fold b.1: Immunoglobulin-like beta-sandwich [48725] (20 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 222938Superfamily b.1.8: Cu,Zn superoxide dismutase-like [49329] (1 family) (S)
    has additional strand at N-terminus
  5. 222939Family b.1.8.1: Cu,Zn superoxide dismutase-like [49330] (2 proteins)
  6. 222952Protein Cu,Zn superoxide dismutase, SOD [49331] (9 species)

Species:

  1. 222953Actinobacillus pleuropneumoniae [TaxId:715] [49340] (1 PDB entry)
  2. 222956African clawed frog (Xenopus laevis) [TaxId:8355] [49334] (1 PDB entry)
  3. 222959Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [49336] (12 PDB entries)
    1. Domain for 1b4l:
    2. Domain for 1b4t:
    3. Domain for 1f18:
    4. Domain for 1f1a:
    5. Domain for 1f1d:
    6. Domains for 1f1g:
      1. 222960Domain d1f1ga_: 1f1g A: [76153]
      2. 222961Domain d1f1gb_: 1f1g B: [76154]
      3. 222962Domain d1f1gc_: 1f1g C: [76155]
      4. 222963Domain d1f1gd_: 1f1g D: [76156]
      5. 222964Domain d1f1ge_: 1f1g E: [76157]
      6. 222965Domain d1f1gf_: 1f1g F: [76158]
        complexed with cu, po4, zn; mutant
    7. Domain for 1jcv:
    8. Domains for 1jk9:
      1. 222979Domain d1jk9a_: 1jk9 A: [63149]
        Other proteins in same PDB: d1jk9b1, d1jk9b2, d1jk9d1, d1jk9d2
      2. 222980Domain d1jk9c_: 1jk9 C: [63152]
        Other proteins in same PDB: d1jk9b1, d1jk9b2, d1jk9d1, d1jk9d2
        complexed with Yccs copper chaperone
        complexed with so4, zn; mutant
    9. Domains for 1sdy:
      1. 222975Domain d1sdya_: 1sdy A: [22285]
      2. 222976Domain d1sdyb_: 1sdy B: [22286]
      3. 222977Domain d1sdyc_: 1sdy C: [22287]
      4. 222978Domain d1sdyd_: 1sdy D: [22288]
        complexed with cu, zn; mutant
    10. Domain for 1yaz:
    11. Domain for 1yso:
    12. Domain for 2jcw:
  4. 222981Cow (Bos taurus) [TaxId:9913] [49332] (15 PDB entries)
    1. Domains for 1cb4:
      1. 223005Domain d1cb4a_: 1cb4 A: [22236]
      2. 223006Domain d1cb4b_: 1cb4 B: [22237]
        complexed with cu, zn; mutant
    2. Domains for 1cbj:
      1. 222982Domain d1cbja_: 1cbj A: [22213]
      2. 222983Domain d1cbjb_: 1cbj B: [22214]
        complexed with cu, zn; mutant
    3. Domains for 1cob:
      1. 223002Domain d1coba_: 1cob A: [22233]
      2. 223003Domain d1cobb_: 1cob B: [22234]
        complexed with co, cu; mutant
    4. Domains for 1e9o:
      1. 222988Domain d1e9oa_: 1e9o A: [22227]
      2. 222989Domain d1e9ob_: 1e9o B: [22228]
        complexed with cu; mutant
    5. Domains for 1e9p:
      1. 222990Domain d1e9pa_: 1e9p A: [22215]
      2. 222991Domain d1e9pb_: 1e9p B: [22216]
        complexed with cu, zn; mutant
    6. Domains for 1e9q:
      1. 223000Domain d1e9qa_: 1e9q A: [22217]
      2. 223001Domain d1e9qb_: 1e9q B: [22218]
        complexed with cu, zn; mutant
    7. Domains for 1sda:
      1. 223007Domain d1sdab_: 1sda B: [22238]
      2. 223008Domain d1sdag_: 1sda G: [22239]
      3. 223009Domain d1sdao_: 1sda O: [22240]
      4. 223010Domain d1sday_: 1sda Y: [22241]
        complexed with cu, no2, zn; mutant
    8. Domains for 1sxa:
      1. 222992Domain d1sxaa_: 1sxa A: [22223]
      2. 222993Domain d1sxab_: 1sxa B: [22224]
        complexed with cu, zn; mutant
    9. Domains for 1sxb:
      1. 222986Domain d1sxba_: 1sxb A: [22221]
      2. 222987Domain d1sxbb_: 1sxb B: [22222]
        complexed with cu, zn; mutant
    10. Domains for 1sxc:
      1. 222984Domain d1sxca_: 1sxc A: [22219]
      2. 222985Domain d1sxcb_: 1sxc B: [22220]
        complexed with cu, zn; mutant
    11. Domains for 1sxn:
      1. 222994Domain d1sxna_: 1sxn A: [22225]
      2. 222995Domain d1sxnb_: 1sxn B: [22226]
        complexed with ca, cu, zn; mutant
    12. Domains for 1sxs:
      1. 222996Domain d1sxsa_: 1sxs A: [22231]
      2. 222997Domain d1sxsb_: 1sxs B: [22232]
        complexed with ium, scn; mutant
    13. Domains for 1sxz:
      1. 222998Domain d1sxza_: 1sxz A: [22229]
      2. 222999Domain d1sxzb_: 1sxz B: [22230]
        complexed with ium, nnn; mutant
    14. Domains for 2sod:
      1. 223011Domain d2sodb_: 2sod B: [22242]
      2. 223012Domain d2sodg_: 2sod G: [22243]
      3. 223013Domain d2sodo_: 2sod O: [22244]
      4. 223014Domain d2sody_: 2sod Y: [22245]
        complexed with cu, zn; mutant
    15. Domain for 3sod:
  5. 223015Escherichia coli [TaxId:562] [49338] (1 PDB entry)
    Monomeric enzyme
  6. 223017Human (Homo sapiens) [TaxId:9606] [49333] (11 PDB entries)
    1. Domains for 1azv:
      1. 223020Domain d1azva_: 1azv A: [22247]
      2. 223021Domain d1azvb_: 1azv B: [22248]
        complexed with cu, zn; mutant
    2. Domain for 1ba9:
    3. Domain for 1dsw:
    4. Domains for 1fun:
      1. 223032Domain d1funa_: 1fun A: [22259]
      2. 223033Domain d1funb_: 1fun B: [22260]
      3. 223034Domain d1func_: 1fun C: [22261]
      4. 223035Domain d1fund_: 1fun D: [22262]
      5. 223036Domain d1fune_: 1fun E: [22263]
      6. 223037Domain d1funf_: 1fun F: [22264]
      7. 223038Domain d1fung_: 1fun G: [22265]
      8. 223039Domain d1funh_: 1fun H: [22266]
      9. 223040Domain d1funi_: 1fun I: [22267]
      10. 223041Domain d1funj_: 1fun J: [22268]
        complexed with cu, so4, zn; mutant
    5. Domain for 1kmg:
    6. Domains for 1l3n:
      1. 223044Domain d1l3na_: 1l3n A: [73549]
      2. 223045Domain d1l3nb_: 1l3n B: [73550]
        complexed with cu1, zn; mutant
    7. Domain for 1mfm:
    8. Domains for 1n18:
      1. 223047Domain d1n18a_: 1n18 A: [79785]
      2. 223048Domain d1n18b_: 1n18 B: [79786]
      3. 223049Domain d1n18c_: 1n18 C: [79787]
      4. 223050Domain d1n18d_: 1n18 D: [79788]
      5. 223051Domain d1n18e_: 1n18 E: [79789]
      6. 223052Domain d1n18f_: 1n18 F: [79790]
      7. 223053Domain d1n18g_: 1n18 G: [79791]
      8. 223054Domain d1n18h_: 1n18 H: [79792]
      9. 223055Domain d1n18i_: 1n18 I: [79793]
      10. 223056Domain d1n18j_: 1n18 J: [79794]
        thermostable mutant
    9. Domains for 1n19:
      1. 223018Domain d1n19a_: 1n19 A: [79795]
      2. 223019Domain d1n19b_: 1n19 B: [79796]
        complexed with cu1, so4, zn; mutant
    10. Domains for 1sos:
      1. 223022Domain d1sosa_: 1sos A: [22249]
      2. 223023Domain d1sosb_: 1sos B: [22250]
      3. 223024Domain d1sosc_: 1sos C: [22251]
      4. 223025Domain d1sosd_: 1sos D: [22252]
      5. 223026Domain d1sose_: 1sos E: [22253]
      6. 223027Domain d1sosf_: 1sos F: [22254]
      7. 223028Domain d1sosg_: 1sos G: [22255]
      8. 223029Domain d1sosh_: 1sos H: [22256]
      9. 223030Domain d1sosi_: 1sos I: [22257]
      10. 223031Domain d1sosj_: 1sos J: [22258]
        complexed with cu, so4, zn; mutant
    11. Domains for 1spd:
      1. 223042Domain d1spda_: 1spd A: [22269]
      2. 223043Domain d1spdb_: 1spd B: [22270]
        complexed with cu, zn; mutant
  7. 223060Photobacterium leiognathi [49337] (7 PDB entries)
    1. Domain for 1bzo:
    2. Domain for 1ib5:
    3. Domain for 1ibb:
    4. Domain for 1ibd:
    5. Domain for 1ibf:
    6. Domain for 1ibh:
    7. Domains for 1yai:
      1. 223061Domain d1yaia_: 1yai A: [22289]
      2. 223062Domain d1yaib_: 1yai B: [22290]
      3. 223063Domain d1yaic_: 1yai C: [22291]
        complexed with cu, zn; mutant
  8. 223070Salmonella typhimurium [TaxId:90371] [49339] (1 PDB entry)
  9. 223075Spinach (Spinacia oleracea) [TaxId:3562] [49335] (1 PDB entry)

More info for Protein Cu,Zn superoxide dismutase, SOD from b.1.8.1: Cu,Zn superoxide dismutase-like

Timeline for Protein Cu,Zn superoxide dismutase, SOD from b.1.8.1: Cu,Zn superoxide dismutase-like: