Lineage for Species: HIV-1 neutralizing Fab 17B (human), kappa L chain

  1. Root: SCOP 1.63
  2. 218896Class b: All beta proteins [48724] (119 folds)
  3. 218897Fold b.1: Immunoglobulin-like beta-sandwich [48725] (20 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 218898Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 220405Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (9 proteins)
  6. 220881Protein Immunoglobulin (constant domains of L and H chains) [48972] (185 species)
  7. 221803Species HIV-1 neutralizing Fab 17B (human), kappa L chain [49065] (3 PDB entries)
    binds to the CD4-induced state of gp120

PDB entries in Species: HIV-1 neutralizing Fab 17B (human), kappa L chain:

  1. Domain(s) for 1g9m:
    1. 221804Domain d1g9mh2: 1g9m H:130-229 [21263]
      Other proteins in same PDB: d1g9mc1, d1g9mc2, d1g9mg_, d1g9mh1, d1g9ml1
      complexed with fuc, ioh, nag; mutant
    2. 221805Domain d1g9ml2: 1g9m L:110-214 [21262]
      Other proteins in same PDB: d1g9mc1, d1g9mc2, d1g9mg_, d1g9mh1, d1g9ml1
  2. Domain(s) for 1g9n:
    1. 221808Domain d1g9nh2: 1g9n H:130-229 [21267]
      Other proteins in same PDB: d1g9nc1, d1g9nc2, d1g9ng_, d1g9nh1, d1g9nl1
      complexed with nag; mutant
    2. 221809Domain d1g9nl2: 1g9n L:110-214 [21266]
      Other proteins in same PDB: d1g9nc1, d1g9nc2, d1g9ng_, d1g9nh1, d1g9nl1
  3. Domain(s) for 1gc1:
    1. 221806Domain d1gc1h2: 1gc1 H:130-229 [21265]
      Other proteins in same PDB: d1gc1c1, d1gc1c2, d1gc1g_, d1gc1h1, d1gc1l1
      complexed with fuc, nag; mutant
    2. 221807Domain d1gc1l2: 1gc1 L:110-213 [21264]
      Other proteins in same PDB: d1gc1c1, d1gc1c2, d1gc1g_, d1gc1h1, d1gc1l1

More info for Species HIV-1 neutralizing Fab 17B (human), kappa L chain from b.1.1.2 Immunoglobulin (constant domains of L and H chains)

Timeline for Species HIV-1 neutralizing Fab 17B (human), kappa L chain from b.1.1.2 Immunoglobulin (constant domains of L and H chains):

  • Species HIV-1 neutralizing Fab 17B (human), kappa L chain from b.1.1.2 Immunoglobulin (constant domains of L and H chains) first appeared (with stable ids) in SCOP 1.55
  • Species HIV-1 neutralizing Fab 17B (human), kappa L chain from b.1.1.2 Immunoglobulin (constant domains of L and H chains) appears in SCOP 1.61
  • Species HIV-1 neutralizing Fab 17B (human), kappa L chain from b.1.1.2 Immunoglobulin (constant domains of L and H chains) does not appear in SCOP 1.65