Lineage for Family b.1.1.2: C1 set domains (antibody constant domain-like)

  1. Root: SCOP 1.67
  2. 362614Class b: All beta proteins [48724] (141 folds)
  3. 362615Fold b.1: Immunoglobulin-like beta-sandwich [48725] (22 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 362616Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 364354Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (22 proteins)

Proteins:

  1. 364355beta2-microglobulin [88600] (4 species)
    1. 364356Species Cow (Bos taurus) [TaxId:9913] [48946] (1 PDB entry)
    2. 364358Species Human (Homo sapiens) [TaxId:9606] [88602] (80 PDB entries)
    3. 364479Species Mouse (Mus musculus) [TaxId:10090] [88603] (59 PDB entries)
    4. 364575Species Rat (Rattus norvegicus) [TaxId:10116] [88601] (6 PDB entries)
  2. 364585CD1, alpha-3 domain [88615] (3 species)
    1. 364586Species Human (Homo sapiens), CD1a [TaxId:9606] [101513] (1 PDB entry)
    2. 364589Species Human (Homo sapiens), CD1b [TaxId:9606] [88617] (3 PDB entries)
    3. 364593Species Mouse (Mus musculus) [TaxId:10090] [88616] (1 PDB entry)
  3. 364596Class I MHC homolog, alpha-3 domain [88610] (4 species)
    gamma, delta T-cell ligand
    1. 364597Species Human (Homo sapiens), Mic-a [TaxId:9606] [48968] (2 PDB entries)
    2. 364600Species Human (Homo sapiens), Mic-b [TaxId:9606] [74826] (1 PDB entry)
    3. 364602Species Mouse (Mus musculus), t10 [TaxId:10090] [101512] (1 PDB entry)
    4. 364607Species Mouse (Mus musculus), t22 [TaxId:10090] [88611] (1 PDB entry)
  4. 364612Class I MHC, alpha-3 domain [88604] (3 species)
    1. 364613Species Human (Homo sapiens) [TaxId:9606] [88605] (65 PDB entries)
    2. 364706Species Mouse (Mus musculus) [TaxId:10090] [88606] (60 PDB entries)
    3. 364802Species Rat (Rattus norvegicus), RT1-AA [TaxId:10116] [88607] (3 PDB entries)
  5. 364807Class II MHC alpha chain, C-terminal domain [88618] (6 species)
    1. 364808Species Human (Homo sapiens), HLA-DM [TaxId:9606] [88619] (1 PDB entry)
      probably orthologous to the mouse H2-DM
    2. 364810Species Human (Homo sapiens), HLA-DQ group [TaxId:9606] [88623] (3 PDB entries)
      probably orthologous to the mouse I-A group
    3. 364815Species Human (Homo sapiens), HLA-DR group [TaxId:9606] [88621] (25 PDB entries)
      probably orthologous to the mouse I-E group
    4. 364850Species Mouse (Mus musculus), H2-DM [TaxId:10090] [88620] (1 PDB entry)
      probably orthologous to the human HLA-DM
    5. 364852Species Mouse (Mus musculus), I-A group [TaxId:10090] [88624] (10 PDB entries)
      probably orthologous to the human HLA-DQ group
    6. 364868Species Mouse (Mus musculus), I-E group [TaxId:10090] [88622] (9 PDB entries)
      probably orthologous to the human HLA-DR group
  6. 364889Class II MHC beta chain, C-terminal domain [88625] (6 species)
    1. 364890Species Human (Homo sapiens), HLA-DM [TaxId:9606] [88626] (1 PDB entry)
      probably orthologous to the mouse H2-DM
    2. 364892Species Human (Homo sapiens), HLA-DQ group [TaxId:9606] [88630] (3 PDB entries)
      probably orthologous to the mouse I-A group
    3. 364897Species Human (Homo sapiens), HLA-DR group [TaxId:9606] [88628] (25 PDB entries)
      probably orthologous to the mouse I-E group
    4. 364932Species Mouse (Mus musculus), H2-DM [TaxId:10090] [88627] (1 PDB entry)
      probably orthologous to the human HLA-DM
    5. 364934Species Mouse (Mus musculus), I-A group [TaxId:10090] [88631] (10 PDB entries)
      probably orthologous to the human HLA-DQ group
    6. 364950Species Mouse (Mus musculus), I-E group [TaxId:10090] [88629] (9 PDB entries)
      probably orthologous to the human HLA-DR group
  7. 364971Fc (IgG) receptor, alpha-3 domain [88612] (2 species)
    1. 364972Species Human (Homo sapiens) [TaxId:9606] [88614] (1 PDB entry)
    2. 364974Species Rat (Rattus norvegicus) [TaxId:10116] [88613] (3 PDB entries)
  8. 364980Hemochromatosis protein Hfe, alpha-3 domain [88608] (1 species)
  9. 364987Immunoglobulin heavy chain alpha constant domain 1, CH1-alpha [88580] (1 species)
  10. 364992Immunoglobulin heavy chain alpha constant domain 2, CH2-alpha [89181] (1 species)
  11. 364996Immunoglobulin heavy chain alpha constant domain 3, CH3-alpha [89183] (1 species)
  12. 365000Immunoglobulin heavy chain epsilon constant domain 2, CH2-epsilon [88594] (1 species)
  13. 365005Immunoglobulin heavy chain epsilon constant domain 3, CH3-epsilon [88596] (1 species)
  14. 365012Immunoglobulin heavy chain epsilon constant domain 4, CH4-epsilon [88598] (1 species)
  15. 365019Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma [88574] (5 species)
    1. 365020Species Hamster (Cricetulus griseus) [TaxId:10029] [88579] (1 PDB entry)
    2. 365023Species Human (Homo sapiens) [TaxId:9606] [88575] (78 PDB entries)
      including humanized antibodies (chimeric proteins with human constant domains)
    3. 365143Species Mouse (Mus musculus) [TaxId:10090] [88576] (287 PDB entries)
    4. 365512Species Mouse (Mus musculus), gamma3 [TaxId:10090] [88577] (6 PDB entries)
    5. 365520Species Rat (Rattus norvegicus) [TaxId:10116] [88578] (4 PDB entries)
  16. 365531Immunoglobulin heavy chain gamma constant domain 2, CH2-gamma [88584] (4 species)
    1. 365532Species Human (Homo sapiens) [TaxId:9606] [88585] (20 PDB entries)
    2. 365566Species Mouse (Mus musculus) [TaxId:10090] [88586] (1 PDB entry)
    3. 365569Species Mouse (Mus musculus), gamma2 [TaxId:10090] [88587] (1 PDB entry)
    4. 365572Species Rat (Rattus norvegicus) [TaxId:10116] [88588] (2 PDB entries)
  17. 365577Immunoglobulin heavy chain gamma constant domain 3, CH3-gamma [88589] (5 species)
    1. 365578Species Guinea pig (Cavia porcellus) [TaxId:10141] [49123] (1 PDB entry)
    2. 365580Species Human (Homo sapiens) [TaxId:9606] [88590] (20 PDB entries)
    3. 365614Species Mouse (Mus musculus) [TaxId:10090] [88591] (2 PDB entries)
    4. 365619Species Mouse (Mus musculus), gamma2 [TaxId:10090] [88592] (1 PDB entry)
    5. 365622Species Rat (Rattus norvegicus) [TaxId:10116] [88593] (2 PDB entries)
  18. 365627Immunoglobulin heavy chain mu constant domain 1, CH1-mu [88582] (1 species)
  19. 365639Immunoglobulin light chain kappa constant domain, CL-kappa [88566] (3 species)
    1. 365640Species Human (Homo sapiens) [TaxId:9606] [88569] (74 PDB entries)
      including humanized antibodies (chimeric proteins with human constant domains)
    2. 365760Species Mouse (Mus musculus) [TaxId:10090] [88567] (270 PDB entries)
    3. 366104Species Rat (Rattus norvegicus) [TaxId:10116] [88568] (4 PDB entries)
  20. 366115Immunoglobulin light chain lambda constant domain, CL-lambda [88570] (3 species)
    1. 366116Species Hamster (Cricetulus griseus) [TaxId:10029] [88573] (1 PDB entry)
    2. 366119Species Human (Homo sapiens) [TaxId:9606] [88572] (42 PDB entries)
    3. 366194Species Mouse (Mus musculus) [TaxId:10090] [88571] (20 PDB entries)
  21. 366220T-cell antigen receptor [49125] (6 species)
    1. 366221Species Human (Homo sapiens), alpha-chain [TaxId:9606] [49127] (9 PDB entries)
    2. 366231Species Human (Homo sapiens), beta-chain [TaxId:9606] [49129] (11 PDB entries)
    3. 366244Species Human (Homo sapiens), delta-chain [TaxId:9606] [63662] (1 PDB entry)
    4. 366249Species Human (Homo sapiens), gamma-chain [TaxId:9606] [63661] (1 PDB entry)
    5. 366254Species Mouse (Mus musculus), alpha-chain [TaxId:10090] [49126] (6 PDB entries)
    6. 366266Species Mouse (Mus musculus), beta-chain [TaxId:10090] [49128] (11 PDB entries)
  22. 366287Zinc-alpha-2-glycoprotein, ZAG, alpha-3 domain [48965] (1 species)
    fat depleting factor related to class I MHC

More info for Family b.1.1.2: C1 set domains (antibody constant domain-like)

Timeline for Family b.1.1.2: C1 set domains (antibody constant domain-like):