Lineage for Protein: Retinoid-X receptor alpha (RXR-alpha)

  1. Root: SCOP 1.73
  2. 631650Class a: All alpha proteins [46456] (258 folds)
  3. 647844Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
    multihelical; 3 layers or orthogonally packed helices
  4. 647845Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (1 family) (S)
  5. 647846Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (32 proteins)
  6. 648202Protein Retinoid-X receptor alpha (RXR-alpha) [48510] (2 species)

Species:

  1. 648203Human (Homo sapiens) [TaxId:9606] [48511] (15 PDB entries)
    1. Domains for 1fby:
      1. 648215Domain d1fbya_: 1fby A: [19275]
      2. 648216Domain d1fbyb_: 1fby B: [19276]
        complex with 9-cis retinoic acid
        complexed with rea
    2. Domains for 1fm6:
      1. 648218Domain d1fm6a_: 1fm6 A: [19277]
        Other proteins in same PDB: d1fm6d_, d1fm6x_
      2. 648219Domain d1fm6u_: 1fm6 U: [19278]
        Other proteins in same PDB: d1fm6d_, d1fm6x_
        complexed with brl, rea
    3. Domain for 1fm9:
    4. Domains for 1g1u:
      1. 648223Domain d1g1ua_: 1g1u A: [60204]
      2. 648224Domain d1g1ub_: 1g1u B: [60205]
      3. 648225Domain d1g1uc_: 1g1u C: [60206]
      4. 648226Domain d1g1ud_: 1g1u D: [60207]
    5. Domains for 1g5y:
      1. 648210Domain d1g5ya_: 1g5y A: [60294]
      2. 648211Domain d1g5yb_: 1g5y B: [60295]
      3. 648212Domain d1g5yc_: 1g5y C: [60296]
      4. 648213Domain d1g5yd_: 1g5y D: [60297]
        complexed with rea
    6. Domain for 1k74:
      • 648220Domain d1k74a_: 1k74 A: [68251]
        Other proteins in same PDB: d1k74d_
        heterodimer with PPAR-gamma complexed with co-activator peptides
        complexed with 544, rea
    7. Domain for 1lbd:
    8. Domain for 1mv9:
      • 648209Domain d1mv9a_: 1mv9 A: [79498]
        complexed with co-activator peptide
        complexed with hxa
    9. Domain for 1mvc:
      • 648204Domain d1mvca_: 1mvc A: [79499]
        complexed with co-activator peptide
        complexed with bm6
    10. Domains for 1mzn:
      1. 648205Domain d1mzna_: 1mzn A: [79704]
      2. 648206Domain d1mznc_: 1mzn C: [79705]
      3. 648207Domain d1mzne_: 1mzn E: [79706]
      4. 648208Domain d1mzng_: 1mzn G: [79707]
        complexed with co-activator peptide
        complexed with bm6
    11. Domain for 1rdt:
      • 648217Domain d1rdta_: 1rdt A: [111787]
        Other proteins in same PDB: d1rdtd_
        complexed with co-activator peptide
        complexed with 570, l79
    12. Domains for 1xdk:
      1. 648234Domain d1xdka_: 1xdk A: [115164]
        Other proteins in same PDB: d1xdkb_, d1xdkf_
      2. 648235Domain d1xdke_: 1xdk E: [115166]
        Other proteins in same PDB: d1xdkb_, d1xdkf_
        complexed with co-activator peptide
        complexed with rea
    13. Domains for 1xv9:
      1. 648227Domain d1xv9a_: 1xv9 A: [116080]
        Other proteins in same PDB: d1xv9b_, d1xv9d_
      2. 648228Domain d1xv9c_: 1xv9 C: [116082]
        Other proteins in same PDB: d1xv9b_, d1xv9d_
        complexed with ci2, f15
    14. Domains for 1xvp:
      1. 648221Domain d1xvpa_: 1xvp A: [116090]
        Other proteins in same PDB: d1xvpb_, d1xvpd_
      2. 648222Domain d1xvpc_: 1xvp C: [116092]
        Other proteins in same PDB: d1xvpb_, d1xvpd_
        complexed with cid, f15
    15. Domains for 2acl:
      1. 648229Domain d2acla1: 2acl A:225-457 [126559]
        automatically matched to d1lbd__
        complexed with l05, rea
      2. 648230Domain d2aclc1: 2acl C:225-457 [126560]
        automatically matched to d1lbd__
        complexed with l05, rea
      3. 648231Domain d2acle1: 2acl E:225-457 [126561]
        automatically matched to d1lbd__
        complexed with l05, rea
      4. 648232Domain d2aclg1: 2acl G:225-457 [126562]
        automatically matched to d1lbd__
        complexed with l05, rea
  2. 648236Mouse (Mus musculus) [TaxId:10090] [48512] (2 PDB entries)
    1. Domain for 1dkf:
    2. Domains for 1xls:
      1. 648238Domain d1xlsa_: 1xls A: [115447]
        Other proteins in same PDB: d1xlse_, d1xlsf_, d1xlsg_, d1xlsh_
      2. 648239Domain d1xlsb_: 1xls B: [115448]
        Other proteins in same PDB: d1xlse_, d1xlsf_, d1xlsg_, d1xlsh_
      3. 648240Domain d1xlsc_: 1xls C: [115449]
        Other proteins in same PDB: d1xlse_, d1xlsf_, d1xlsg_, d1xlsh_
      4. 648241Domain d1xlsd_: 1xls D: [115450]
        Other proteins in same PDB: d1xlse_, d1xlsf_, d1xlsg_, d1xlsh_
        complexed with rea, tcd; mutant

More info for Protein Retinoid-X receptor alpha (RXR-alpha) from a.123.1.1: Nuclear receptor ligand-binding domain

Timeline for Protein Retinoid-X receptor alpha (RXR-alpha) from a.123.1.1: Nuclear receptor ligand-binding domain: