SCOPe 2.03: Superfamily a.118.1: ARM repeat

Lineage for Superfamily a.118.1: ARM repeat

1. Root: SCOPe 2.03

2. Class a: All alpha proteins [46456] (284 folds)

3. Fold a.118: alpha-alpha superhelix [48370] (24 superfamilies)
   multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix

4. Superfamily a.118.1: ARM repeat [48371] (24 families)

Families:

1. a.118.1.1: Armadillo repeat [48372] (7 proteins)
   this is a repeat family; one repeat unit is 1ee4 A:288-330 found in domain

2. a.118.1.2: HEAT repeat [48385] (2 proteins)
   Pfam PF02985
   this is a repeat family; one repeat unit is 1b3u A:295-335 found in domain

3. a.118.1.3: Clathrin heavy chain proximal leg segment [48390] (1 protein)
   this is a repeat family; one repeat unit is 1b89 A:1443-1475 found in domain

4. a.118.1.4: Clathrin heavy-chain linker domain [48393] (1 protein)
   this is a repeat family; one repeat unit is 1bpo B:444-471 found in domain

5. a.118.1.5: Leucine-rich repeat variant [48396] (1 protein)
   this is a repeat family; one repeat unit is 1lrv A:123-147 found in domain

6. a.118.1.6: Phoshoinositide 3-kinase (PI3K) helical domain [48399] (1 protein)
   automatically mapped to Pfam PF00613
   this is a repeat family; one repeat unit is 1e8y A:598-635 found in domain

7. a.118.1.7: Leukotriene A4 hydrolase C-terminal domain [63608] (1 protein)
   automatically mapped to Pfam PF09127
   this is a repeat family; one repeat unit is 1gw6 A:513-547 found in domain

8. a.118.1.8: Pumilio repeat [63611] (2 proteins)
   this is a repeat family; one repeat unit is 1ib2 A:982-1018 found in domain

9. a.118.1.9: Regulatory subunit H of the V-type ATPase [63614] (1 protein)
   this is a repeat family; one repeat unit is 3j9t P:257-303 found in domain

10. a.118.1.10: Clathrin adaptor core protein [74771] (3 proteins)
    automatically mapped to Pfam PF01602

11. a.118.1.13: PHAT domain [89129] (1 protein)
    pseudo-HEAT repeat
    automatically mapped to Pfam PF09246
    this is a repeat family; one repeat unit is 1oxj A:672-722 found in domain

12. a.118.1.14: MIF4G domain-like [100908] (5 proteins)
    duplication: family members contains 2 or more structurally similar domains of this fold connected by unstructured linkers
    this is a repeat family; one repeat unit is 1hu3 A:905-942 found in domain

13. a.118.1.15: Mo25 protein [101407] (2 proteins)
    automatically mapped to Pfam PF08569
    this is a repeat family; one repeat unit is 1upl A:195-240 found in domain

14. a.118.1.16: PBS lyase HEAT-like repeat [101410] (2 proteins)
    Pfam PF03130
    this is a repeat family; one repeat unit is 1oyz A:122-155 found in domain

15. a.118.1.17: BC3264-like [109965] (3 proteins)
    Pfam PF06352; DUF1061
    this is a repeat family; one repeat unit is 1t06 A:120-163 found in domain

16. a.118.1.18: Eukaryotic translation initiation factor 3 subunit 12, eIF3k, N-terminal domain [109968] (1 protein)
    N-terminal part of Pfam PF06272

17. a.118.1.19: Exportin HEAT-like repeat [117002] (1 protein)
    automatically mapped to Pfam PF08767
    this is a repeat family; one repeat unit is 3gb8 A:533-577 found in domain

18. a.118.1.20: B56-like [140819] (1 protein)
    Pfam PF01603; Protein phosphatase 2A regulatory B subunit family

19. a.118.1.21: HspBP1 domain [140822] (1 protein)
    this is a repeat family; one repeat unit is 1xqr A:200-242 found in domain

20. a.118.1.22: GUN4-associated domain [140825] (2 proteins)
    PfamB PB089177
    this is a repeat family; one repeat unit is 1z3x A:34-71 found in domain

21. a.118.1.23: Diap1 N-terninal region-like [140830] (2 proteins)
    contains two consequitive Pfam domains in one superhelical segment: Pfam PF06371 and Pfam PF06367
    this is a repeat family; one repeat unit is 2bap A:217-262 found in domain

22. a.118.1.24: Plakophilin 1 helical region [140833] (1 protein)
    this is a repeat family; one repeat unit is 1xm9 A:298-341 found in domain

23. a.118.1.25: RPA1889-like [158764] (1 protein)
    Pfam PF09450; DUF2019; similar to the BC3264-like family
    this is a repeat family; one repeat unit is 2i9c A:56-84 found in domain

24. a.118.1.0: automated matches [191340] (1 protein)
    not a true family

More info for Superfamily a.118.1: ARM repeat

Timeline for Superfamily a.118.1: ARM repeat:

• Superfamily a.118.1: ARM repeat first appeared (with stable ids) in SCOP 1.55
  
• Superfamily a.118.1: ARM repeat appears in SCOPe 2.02
  
• Superfamily a.118.1: ARM repeat appears in SCOPe 2.04
  
• Superfamily a.118.1: ARM repeat appears in the current release, SCOPe 2.08