SCOPe 2.03: Protein: C3D, a C3 fragment and ligand for complement receptor 2

Lineage for Protein: C3D, a C3 fragment and ligand for complement receptor 2

Root: SCOPe 2.03
Class a: All alpha proteins [46456] (284 folds)

Fold a.102: alpha/alpha toroid [48207] (6 superfamilies)
multihelical; up to seven alpha-hairpins are arranged in closed circular array; there may be sequence similarities between different superfamilies

Superfamily a.102.4: Terpenoid cyclases/Protein prenyltransferases [48239] (5 families)
Family a.102.4.4: Complement components [48251] (3 proteins)
probably related to other families, but has no known enzymatic activity
Protein C3D, a C3 fragment and ligand for complement receptor 2 [48252] (2 species)

Species:

Human (Homo sapiens) [TaxId:9606] [48253] (12 PDB entries)
1. Domain for 1c3d:
  - Domain d1c3da_: 1c3d A: [18874]
    complexed with gol
2. Domain for 1ghq:
  - Domain d1ghqa_: 1ghq A: [60521]
    Other proteins in same PDB: d1ghqb1, d1ghqb2, d1ghqc1, d1ghqc2
    complexed with ndg, zn
3. Domain for 1w2s:
  - Domain d1w2sa1: 1w2s A:1-307 [120604]
    Other proteins in same PDB: d1w2sb1, d1w2sb2
    automatically matched to d1ghqa_
4. Domains for 2gox:
  1. Domain d2goxa_: 2gox A: [161433]
    Other proteins in same PDB: d2goxb1, d2goxd_
    automated match to d1c3da_
  2. Domain d2goxc_: 2gox C: [161434]
    Other proteins in same PDB: d2goxb1, d2goxd_
    automated match to d1c3da_
5. Domains for 2noj:
  1. Domain d2noja_: 2noj A: [148324]
    Other proteins in same PDB: d2nojb1, d2nojd_, d2nojf_, d2nojh_
    automated match to d1c3da_
  2. Domain d2nojc_: 2noj C: [148326]
    Other proteins in same PDB: d2nojb1, d2nojd_, d2nojf_, d2nojh_
    automated match to d1c3da_
  3. Domain d2noje_: 2noj E: [148328]
    Other proteins in same PDB: d2nojb1, d2nojd_, d2nojf_, d2nojh_
    automated match to d1c3da_
  4. Domain d2nojg_: 2noj G: [148330]
    Other proteins in same PDB: d2nojb1, d2nojd_, d2nojf_, d2nojh_
    automated match to d1c3da_
6. Domain for 2wy7:
  - Domain d2wy7a_: 2wy7 A: [169687]
    automated match to d1ghqa_
    complexed with gol
7. Domain for 2wy8:
  - Domain d2wy8a_: 2wy8 A: [169688]
    automated match to d1ghqa_
    complexed with gol
8. Domains for 2xqw:
  1. Domain d2xqwa_: 2xqw A: [170300]
    automated match to d1c3da_
  2. Domain d2xqwb_: 2xqw B: [170301]
    automated match to d1c3da_
9. Domains for 3d5r:
  1. Domain d3d5ra_: 3d5r A: [157403]
    Other proteins in same PDB: d3d5rc1, d3d5rd_
    automated match to d1c3da_
  2. Domain d3d5rb_: 3d5r B: [157404]
    Other proteins in same PDB: d3d5rc1, d3d5rd_
    automated match to d1c3da_
10. Domains for 3d5s:
  1. Domain d3d5sa_: 3d5s A: [157407]
    Other proteins in same PDB: d3d5sc1, d3d5sd_
    automated match to d1c3da_
  2. Domain d3d5sb_: 3d5s B: [157408]
    Other proteins in same PDB: d3d5sc1, d3d5sd_
    automated match to d1c3da_
11. Domains for 3rj3:
  1. Domain d3rj3a_: 3rj3 A: [195832]
    automated match to d1ghqa_
    complexed with gol; mutant
  2. Domain d3rj3b_: 3rj3 B: [195830]
    automated match to d1ghqa_
    complexed with gol; mutant
  3. Domain d3rj3c_: 3rj3 C: [195831]
    automated match to d1ghqa_
    complexed with gol; mutant
12. Domain for 4m76:
  - Domain d4m76a_: 4m76 A: [228103]
    Other proteins in same PDB: d4m76b_
    automated match to d2goxa_
    complexed with ni
Norway rat (Rattus norvegicus) [TaxId:10116] [48254] (2 PDB entries)
1. Domain for 1qqf:
  - Domain d1qqfa_: 1qqf A: [18875]
    N-terminally truncated fragment
2. Domains for 1qsj:
  1. Domain d1qsja_: 1qsj A: [18876]
    N-terminally truncated fragment
  2. Domain d1qsjb_: 1qsj B: [18877]
    N-terminally truncated fragment
  3. Domain d1qsjc_: 1qsj C: [18878]
    N-terminally truncated fragment
  4. Domain d1qsjd_: 1qsj D: [18879]
    N-terminally truncated fragment

More info for Protein C3D, a C3 fragment and ligand for complement receptor 2 from a.102.4.4: Complement components

Timeline for Protein C3D, a C3 fragment and ligand for complement receptor 2 from a.102.4.4: Complement components:

Protein C3D, a C3 fragment and ligand for complement receptor 2 from a.102.4.4: Complement components first appeared (with stable ids) in SCOP 1.55, called Protein C3D, a C3 fragment and ligand for complement receptor 2 from a.102.4.4: C3D, a C3 fragment and ligand for complement receptor 2
Protein C3D, a C3 fragment and ligand for complement receptor 2 from a.102.4.4: Complement components appears in SCOPe 2.02
Protein C3D, a C3 fragment and ligand for complement receptor 2 from a.102.4.4: Complement components is called Protein Thio-ester containing domain (TED) from Complement C3, aka C3d or C3dg from a.102.4.4: Complement components in SCOPe 2.04
Protein C3D, a C3 fragment and ligand for complement receptor 2 from a.102.4.4: Complement components appears in the current release, SCOPe 2.08, called Protein Thio-ester containing domain (TED) from Complement C3, aka C3d or C3dg from a.102.4.4: Complement components