SCOP 1.67: Protein: Protein farnesyltransferase, beta-subunit

Lineage for Protein: Protein farnesyltransferase, beta-subunit

Root: SCOP 1.67
Class a: All alpha proteins [46456] (202 folds)

Fold a.102: alpha/alpha toroid [48207] (5 superfamilies)
multihelical; up to seven alpha-hairpins are arranged in closed circular array; there may be sequence similarities between different superfamilies

Superfamily a.102.4: Terpenoid cyclases/Protein prenyltransferases [48239] (4 families)
Family a.102.4.3: Protein prenyltransferases [48246] (2 proteins)
Protein Protein farnesyltransferase, beta-subunit [48247] (2 species)

Species:

Human (Homo sapiens) [TaxId:9606] [69090] (4 PDB entries)
1. Domain for 1jcq:
  - Domain d1jcqb_: 1jcq B: [66505]
    Other proteins in same PDB: d1jcqa_
    complexed with 739, acy, fpp, suc, zn; mutant
2. Domain for 1ld7:
  - Domain d1ld7b_: 1ld7 B: [73837]
    Other proteins in same PDB: d1ld7a_
    complexed with fpp, suc, u66, zn
3. Domain for 1ld8:
  - Domain d1ld8b_: 1ld8 B: [73839]
    Other proteins in same PDB: d1ld8a_
    complexed with acy, fpp, suc, u49, zn
4. Domain for 1mzc:
  - Domain d1mzcb_: 1mzc B: [85240]
    Other proteins in same PDB: d1mzca_
    complexed with bne, fpp, suc, zn
Rat (Rattus norvegicus) [TaxId:10116] [48248] (23 PDB entries)
1. Domain for 1d8d:
  - Domain d1d8db_: 1d8d B: [18866]
    Other proteins in same PDB: d1d8da_
    complex with K-ras4b peptide substrate
2. Domain for 1d8e:
  - Domain d1d8eb_: 1d8e B: [18869]
    Other proteins in same PDB: d1d8ea_
    complex with k-ras4b peptide substrate and FPP analog
    complexed with ace, fii
3. Domain for 1fpp:
  - Domain d1fppb_: 1fpp B: [18870]
    Other proteins in same PDB: d1fppa_
    complexed with fpp, po4, zn
4. Domain for 1ft1:
  - Domain d1ft1b_: 1ft1 B: [18867]
    Other proteins in same PDB: d1ft1a_
    complexed with zn
5. Domain for 1ft2:
  - Domain d1ft2b_: 1ft2 B: [18871]
    Other proteins in same PDB: d1ft2a_
    complexed with fpp, zn
6. Domain for 1jcr:
  - Domain d1jcrb_: 1jcr B: [66507]
    Other proteins in same PDB: d1jcra_
    complexed with acy, fpp, zn
7. Domain for 1jcs:
  - Domain d1jcsb_: 1jcs B: [66509]
    Other proteins in same PDB: d1jcsa_
    complexed with acy, fii, zn
8. Domain for 1kzo:
  - Domain d1kzob_: 1kzo B: [77639]
    Other proteins in same PDB: d1kzoa_
    complex with k-ras4b peptide product and farnesyl diphosphate substrate bound simultaneously
    complexed with acy, far, fpp, zn
9. Domain for 1kzp:
  - Domain d1kzpb_: 1kzp B: [77641]
    Other proteins in same PDB: d1kzpa_
    complex with k-ras4b peptide product
    complexed with acy, far, zn
10. Domains for 1n4p:
  1. Domain d1n4pb_: 1n4p B: [91624]
    Other proteins in same PDB: d1n4pa_, d1n4pc_, d1n4pe_, d1n4pg_, d1n4pi_, d1n4pk_
  2. Domain d1n4pd_: 1n4p D: [91626]
    Other proteins in same PDB: d1n4pa_, d1n4pc_, d1n4pe_, d1n4pg_, d1n4pi_, d1n4pk_
  3. Domain d1n4pf_: 1n4p F: [91628]
    Other proteins in same PDB: d1n4pa_, d1n4pc_, d1n4pe_, d1n4pg_, d1n4pi_, d1n4pk_
  4. Domain d1n4ph_: 1n4p H: [91630]
    Other proteins in same PDB: d1n4pa_, d1n4pc_, d1n4pe_, d1n4pg_, d1n4pi_, d1n4pk_
  5. Domain d1n4pj_: 1n4p J: [91632]
    Other proteins in same PDB: d1n4pa_, d1n4pc_, d1n4pe_, d1n4pg_, d1n4pi_, d1n4pk_
  6. Domain d1n4pl_: 1n4p L: [91634]
    Other proteins in same PDB: d1n4pa_, d1n4pc_, d1n4pe_, d1n4pg_, d1n4pi_, d1n4pk_
    complexed with cl, grg, tth, zn
11. Domains for 1n4q:
  1. Domain d1n4qb_: 1n4q B: [91636]
    Other proteins in same PDB: d1n4qa_, d1n4qc_, d1n4qe_, d1n4qg_, d1n4qi_, d1n4qk_
  2. Domain d1n4qd_: 1n4q D: [91638]
    Other proteins in same PDB: d1n4qa_, d1n4qc_, d1n4qe_, d1n4qg_, d1n4qi_, d1n4qk_
  3. Domain d1n4qf_: 1n4q F: [91640]
    Other proteins in same PDB: d1n4qa_, d1n4qc_, d1n4qe_, d1n4qg_, d1n4qi_, d1n4qk_
  4. Domain d1n4qh_: 1n4q H: [91642]
    Other proteins in same PDB: d1n4qa_, d1n4qc_, d1n4qe_, d1n4qg_, d1n4qi_, d1n4qk_
  5. Domain d1n4qj_: 1n4q J: [91644]
    Other proteins in same PDB: d1n4qa_, d1n4qc_, d1n4qe_, d1n4qg_, d1n4qi_, d1n4qk_
  6. Domain d1n4ql_: 1n4q L: [91646]
    Other proteins in same PDB: d1n4qa_, d1n4qc_, d1n4qe_, d1n4qg_, d1n4qi_, d1n4qk_
    complexed with cl, mgm, tth, zn
12. Domains for 1n4r:
  1. Domain d1n4rb_: 1n4r B: [91648]
    Other proteins in same PDB: d1n4ra_, d1n4rc_, d1n4re_, d1n4rg_, d1n4ri_, d1n4rk_
  2. Domain d1n4rd_: 1n4r D: [91650]
    Other proteins in same PDB: d1n4ra_, d1n4rc_, d1n4re_, d1n4rg_, d1n4ri_, d1n4rk_
  3. Domain d1n4rf_: 1n4r F: [91652]
    Other proteins in same PDB: d1n4ra_, d1n4rc_, d1n4re_, d1n4rg_, d1n4ri_, d1n4rk_
  4. Domain d1n4rh_: 1n4r H: [91654]
    Other proteins in same PDB: d1n4ra_, d1n4rc_, d1n4re_, d1n4rg_, d1n4ri_, d1n4rk_
  5. Domain d1n4rj_: 1n4r J: [91656]
    Other proteins in same PDB: d1n4ra_, d1n4rc_, d1n4re_, d1n4rg_, d1n4ri_, d1n4rk_
  6. Domain d1n4rl_: 1n4r L: [91658]
    Other proteins in same PDB: d1n4ra_, d1n4rc_, d1n4re_, d1n4rg_, d1n4ri_, d1n4rk_
    complexed with cl, mes, so4, tth, zn
13. Domains for 1n4s:
  1. Domain d1n4sb_: 1n4s B: [91660]
    Other proteins in same PDB: d1n4sa_, d1n4sc_, d1n4se_, d1n4sg_, d1n4si_, d1n4sk_
  2. Domain d1n4sd_: 1n4s D: [91662]
    Other proteins in same PDB: d1n4sa_, d1n4sc_, d1n4se_, d1n4sg_, d1n4si_, d1n4sk_
  3. Domain d1n4sf_: 1n4s F: [91664]
    Other proteins in same PDB: d1n4sa_, d1n4sc_, d1n4se_, d1n4sg_, d1n4si_, d1n4sk_
  4. Domain d1n4sh_: 1n4s H: [91666]
    Other proteins in same PDB: d1n4sa_, d1n4sc_, d1n4se_, d1n4sg_, d1n4si_, d1n4sk_
  5. Domain d1n4sj_: 1n4s J: [91668]
    Other proteins in same PDB: d1n4sa_, d1n4sc_, d1n4se_, d1n4sg_, d1n4si_, d1n4sk_
  6. Domain d1n4sl_: 1n4s L: [91670]
    Other proteins in same PDB: d1n4sa_, d1n4sc_, d1n4se_, d1n4sg_, d1n4si_, d1n4sk_
    complexed with cl, grg, tth, zn
14. Domain for 1n94:
  - Domain d1n94b_: 1n94 B: [80332]
    Other proteins in same PDB: d1n94a_
    complexed with hfp, tin, zn
15. Domain for 1n95:
  - Domain d1n95b_: 1n95 B: [80334]
    Other proteins in same PDB: d1n95a_
    complexed with fth, hfp, zn
16. Domain for 1n9a:
  - Domain d1n9ab_: 1n9a B: [80339]
    Other proteins in same PDB: d1n9aa_
    complexed with fti, hfp, zn
17. Domain for 1ni1:
  - Domain d1ni1b_: 1ni1 B: [91889]
    Other proteins in same PDB: d1ni1a_
    complexed with 2c5, hfp, zn
18. Domain for 1nl4:
  - Domain d1nl4b_: 1nl4 B: [80618]
    Other proteins in same PDB: d1nl4a_
    complexed with ftl, hfp, zn; mutant
19. Domain for 1o1r:
  - Domain d1o1rb_: 1o1r B: [86548]
    Other proteins in same PDB: d1o1ra_
    complexed with grg, zn
20. Domain for 1o1s:
  - Domain d1o1sb_: 1o1s B: [86550]
    Other proteins in same PDB: d1o1sa_
    complexed with 1nh, zn
21. Domain for 1o1t:
  - Domain d1o1tb_: 1o1t B: [86552]
    Other proteins in same PDB: d1o1ta_
    complexed with 2nh, mg, zn
22. Domain for 1o5m:
  - Domain d1o5mb_: 1o5m B: [92508]
    Other proteins in same PDB: d1o5ma_
    complexed with 336, fpp, zn
23. Domain for 1qbq:
  - Domain d1qbqb_: 1qbq B: [18868]
    Other proteins in same PDB: d1qbqa_
    complexed with ace, act, hfp, zn

More info for Protein Protein farnesyltransferase, beta-subunit from a.102.4.3: Protein prenyltransferases

Timeline for Protein Protein farnesyltransferase, beta-subunit from a.102.4.3: Protein prenyltransferases:

Protein Protein farnesyltransferase, beta-subunit from a.102.4.3: Protein prenyltransferases first appeared (with stable ids) in SCOP 1.55
Protein Protein farnesyltransferase, beta-subunit from a.102.4.3: Protein prenyltransferases appears in SCOP 1.65
Protein Protein farnesyltransferase, beta-subunit from a.102.4.3: Protein prenyltransferases appears in SCOP 1.69
Protein Protein farnesyltransferase, beta-subunit from a.102.4.3: Protein prenyltransferases appears in the current release, SCOPe 2.08